YALI0B21164g

Overview

Description weakly similar to uniprot|Q10321 Schizosaccharomyces pombe shg1, Set1 complex component
Locus type CDS
Locus tag YALI0B21164g

Location

Species Yarrowia lipolytica Positions 2778529..2779557
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1029 (nuc.)
Previous locus YALI0B21142g Next locus YALI0B21186g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21164g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21164gYALI0B21164g_mRNA-001YALI0B21164g_CDS-001

Nucleotide sequence

 

>YALI0B21164g
ATGACGGACGCGCGCAAGCTGGTGGAGGAGTTTCGTCGGTCGGGAAAGTTCGATGAGATG
CGACGCGATGCCCTGGCCAAATTCAAACAGTCTGATCTACACGGCGACATTCGACAGCAG
ATCCAGGAGATCGTGGACAAGGAAATCGAGAGCCAACCGCAGGTCCTGTCACGAGGACGA
GGCAAGAGCGCGGCACTGATCGAGGGAGCCATCAACAGAAACAGCGGCAAAGATTCAGTC
TACACCAAAGTCGATGGCTATGTTGATGGAGCTATTGATCAAAGCCTGGAAAAGAAAATC
CAGGACGCGTTGCAAGGTATGGTTGGTGGAGAGGAAAAGACTGAGACTAAGACTGAGACC
AAGGCTGAGATCCAGGACCACTCTGTGTCCGAGTTTCCCGCTGCCAAAACAGAAAATGCC
GCCGAATCCAAACCCTCGAATGAGCCTCTCGCTGATACCAAGCCTGAACCCTCCGCTGAC
GTATCCATGACAGAGTAGATGCGCTGTTCCGGAGCAAGTGTCGTTGATAGCCAGCCGCAA
TCACCGGTATATATAAACCGGGATATGGGTTCTGAGTTTTCCGCGATCAACTTTTCCGCA
GTCTGCGGTTTACCACAAGCTCTACATCTTGGGTGCAGAGAGAATGGGGGTCACCGCTGT
AGCATACGCGTGTGTAAAGCAGGATATGGACTCAAAATGGCAGTCCAAGCGAGTGCAATC
ACGGTACTTTGGCAATGCTTATGGACTGGTATTTCTCAGATGTGTTCGTTGCATTAAGCC
ACCTGGGTCACCCACCACCAGACCACATCCCGATCTCTCCGTCAAAGGGAGTCTATTCAA
GACCCTCTCTCGTGTAAAGATGGGCCATACACATGCCGCATATCATGCTCGCTGTTACAT
GGACCACGCCCTTCATTACCGCTGCTGTGCTCACTATTTCCTGCGATGCGAGGTTAGTTC
AGGTTGGGGCAGGGGACATGGATATAACTTGTAATGTATTTGTAATGAAGAATGAACGAT
CTGAGTCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21164g_CDS-001

Protein length: 166 aa.
Product: Conserved hypothetical protein

>YALI0B21164g_CDS-001 MTDARKLVEEFRRSGKFDEMRRDALAKFKQSDLHGDIRQQIQEIVDKEIESQPQVLSRGR
GKSAALIEGAINRNSGKDSVYTKVDGYVDGAIDQSLEKKIQDALQGMVGGEEKTETKTET
KAEIQDHSVSEFPAAKTENAAESKPSNEPLADTKPEPSADVSMTE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG