YALI0B21098g

Overview

Description similar to uniprot|P40032 Saccharomyces cerevisiae YER049W TPA1 Conserved protein of unknown function
Locus type CDS
Locus tag YALI0B21098g

Location

Species Yarrowia lipolytica Positions 2771519..2773463
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1945 (nuc.)
Previous locus YALI0B21076g Next locus YALI0B21120g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21098g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21098gYALI0B21098g_mRNA-001YALI0B21098g_CDS-001

Nucleotide sequence

 

>YALI0B21098g
ATGACCGACACCAAACGAGCTCCCGAGGAAACCGGTCTGCCCGACGCCAAGCGTGCTCAC
ATTGACGACGTTGAAAAATGCTTCCACAAGGGACTGCTTGACCAGACCTCTCAGGATGAG
CTCAAGACACAGATTGCTGAGTCGGGACCCTACAAGCACGGAGTTATCCCCCAGCTGATT
GACGATGAGCTGTTGAGAAGCGTGCGAAAGGAAATCATGGAAGGAGTACATTTCACCCGA
AAGGAAACCGATATCTACAAGGTGTTTCAGACCGGAGACCTGGCCAACCTATCTGGTCTC
AGCGAAGAGGAGCTGGGTACCTTGCCCTCGCTCTTCAAGCTCCGAAATGCCATGTACTCT
CGAGAGTTCCGTCACTTCATGTCCTACATCACCGGAGCCGGTCATCTGTCTGGTTCGAAG
CAGGATATGAGCATTAACGTTTACCAGAAGAGCTGCCACTTGCTCAACCACGATGATGTC
ATTGGTACCCGACGAATCTCGTACATTCTTTACTTGCCTGATCCCGACGAGCCATGGAAC
CCTCGATGGGGAGGAGCTCTTCGACTGTTCCCCACTATTCGACCCAATGTGCCTGCTTCC
GACTGGACCGTTTCTATTCCCCCTGCTTGGAACCAGATGGCTCTATTCAAGATCCAGCCC
GGTCTCTCGTTCCACGATGTCGAGGAGGTGTACGTTGATAAGCCCCGAATGAGTATTTCT
GGCTGGTTCCATATTCCCGATGTTGGAGAGGAGGGATATATTGAGGGCGAGAAGGAGGAA
ACGGAAGCCCTGTCTTCTCTGAAGCAATTGACCAGCAAGAGTCTTCGAGAACACGACTTC
CCCAAACGAACTCCCGGTCAGGTTCCCGAGGACGAGTTTGCTCATCTCAAGGAGGGTCCC
AAGGACGATGACGATCTGTTTCTGTCTGACGACGACGTCAAGTACCTCAGCAAGTACCTC
AATCCGCATCTGCTGACAATCAAGACCGTCAAGCAGCTCAACGATTTGTTTTGCACCAAC
TCGCAGCTCGAGATCAAGGATTTCCTCAACAGCGAGTACGTGGGTGTTCTGAAGAAAACA
ATTGATGCCGAGGACTCTAGACCTCCCAAGGAGATGCCCCAGGTGTCTGAGGAGATTGTA
CTACCCTGGAAGCTCGCTCGACCTCCTCACAAGGCCCGATACATGTACCTGGATGGCTCT
GAGGAGGCCGATAAGGAGCCTGAGGTCGGAGAAGAAGAGGTTACAGTTCGGCCTGACGAG
AATGGAGGCTTCGAATACTCTGAAACGATTCTCTCTGGACTCAAGGACACTGACAAAGCA
GCTACTTCCAAGGTTTCGGAGGTTGCTGCCCTGTTCAAATCTTCAGCTCTGCGACGATGG
ATCTCGCGGATTTCTTCTCTGGCTCTAAAGTCCGAGAACATCATTGCTCGACGATTCCGA
CCTGGCTTTGACTTCACTCTGGCCACTGCCCAAGACGAGTCTGACATTGCTCTAGAAGCC
ACTTTGTGCCTGACCCCCACTAAGGGCTGGGAAGACGGCGAGTATGGTGGATACGAGCTG
TGTATGGCTGTTGACGAAGATGCCGATGACGACCCGGCTGTATACCGAGGAGCCAAAGCC
AAAGAGGCTGGTGAAGGAGAGGGCGATGAGGAAGATGAGGATGAAGATGAAGACGATCCC
GTTCTTCTGACCTCCCAGGCCTCGTGGAACACCCTCAACATCTTTGTCCGAGACAAGGGC
ATTCTCAAGTTTGTCAAGTACGTGTCTAAGAACGCTCCTGGTTCTCGATGGGACATTTCT
GCCGAGTGGCAGGTGGAGTACGTTGGAGATGATGAAGAGGAAGAGGACGAGCATGAAGAG
TAGGGCTCAGAGGAAAAGGAGTACGAATAACTATAGATGTAATATAATGATTAATGTTCA
TTTGAATGGACAATGACCTTTATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21098g_CDS-001

Protein length: 621 aa.
Product: Poly(rA)-binding protein, putative

>YALI0B21098g_CDS-001 MTDTKRAPEETGLPDAKRAHIDDVEKCFHKGLLDQTSQDELKTQIAESGPYKHGVIPQLI
DDELLRSVRKEIMEGVHFTRKETDIYKVFQTGDLANLSGLSEEELGTLPSLFKLRNAMYS
REFRHFMSYITGAGHLSGSKQDMSINVYQKSCHLLNHDDVIGTRRISYILYLPDPDEPWN
PRWGGALRLFPTIRPNVPASDWTVSIPPAWNQMALFKIQPGLSFHDVEEVYVDKPRMSIS
GWFHIPDVGEEGYIEGEKEETEALSSLKQLTSKSLREHDFPKRTPGQVPEDEFAHLKEGP
KDDDDLFLSDDDVKYLSKYLNPHLLTIKTVKQLNDLFCTNSQLEIKDFLNSEYVGVLKKT
IDAEDSRPPKEMPQVSEEIVLPWKLARPPHKARYMYLDGSEEADKEPEVGEEEVTVRPDE
NGGFEYSETILSGLKDTDKAATSKVSEVAALFKSSALRRWISRISSLALKSENIIARRFR
PGFDFTLATAQDESDIALEATLCLTPTKGWEDGEYGGYELCMAVDEDADDDPAVYRGAKA
KEAGEGEGDEEDEDEDEDDPVLLTSQASWNTLNIFVRDKGILKFVKYVSKNAPGSRWDIS
AEWQVEYVGDDEEEEDEHEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG