YALI0B21054g

Overview

Description weakly similar to uniprot|Q8VCG3 Mus musculus Hypothetical protein
Locus type CDS
Locus tag YALI0B21054g

Location

Species Yarrowia lipolytica Positions 2767496..2769486
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1991 (nuc.)
Previous locus YALI0B21032g Next locus YALI0B21076g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21054g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21054gYALI0B21054g_mRNA-001YALI0B21054g_CDS-001

Nucleotide sequence

 

>YALI0B21054g
ATGAAGCTACTGGTGTGCCTGGAAAACAGCGGGTTACTCAAAGAAGTCAAGGTCAGTCTC
GCCACGGGTGACCACAAGGTACGTGACGTGGGGTTCAGTGAAGGTAGCGCGGTGCACGTA
TCCAAGGTGATTTACGACCAGAGACAGTACGTTGCTCTCGGGCGGAGGGATGGAAGTGTG
GAGGTGCTGGACGTGGAGATGGGCACACCGAGAAGGCTTTACCCTGCCCACAGAGAGGTA
TTTCACCCCTCAGAGCTGTTCGCGTCCATTGATTATGCACACAATCTGCTCTATACATGC
ACCACTGGAGGCATGGTGACGGTGAGGGAATGCAAGCTGGACCAGACACAGACGAGCGAC
GAACTGCTCAGCACACATCACCTGGGCGATGCAGTGTCTGTGTTACGCCCCCACCCTACT
CAGCGAGGAGTAGTCGCTTTTGGAGGACCACAGAGAGTTCTGGAGGTGGCCATCATCCGG
ACCAACCGCAGGAACCTGTGGCGATCGAGCAAGGAAGAGTACATTTGGATTTCAGACGTG
AGATTCACTAATGTGCGTGGGACAAGCGATAATGCCGAGCCAGGCTACTCGTTGGTGGCG
GTGTCACGATATGGAGACGCCTACATTTACCAGACAAATGTTTCTGCCCGGCCGGTCCGG
AAAATCCAGGTTGGCGACTATCCACTCACACATCTCCACATGAACCACTCGTTAGGCGGA
GACGCCTTCTACGTGGCCAACTCGCAGAACCAGGTGTCGTTGGTGGATTATGACGGCCAG
GTGCGTCACAAGGTGTGTATGCCTGAAGGGAGTGTTTTTCTGGCAGATTTCTTTAGTCCA
GCAACGCGCCAGGACCCCCGAGTGCCTCAGACAGAGCCCATTCCGTCCACATCCATTTCC
CGAGGGGATAATCTGCAAAGTGCGCTGTGGGGCGAGTTGCTGATGCGAAGAAGACAGCAT
ACTCGACAGCAACAACTTCAGAACCAGAACCAGAGTACGGAACCGGATCCTGATGCAGAC
AACACAGACCACTACGTGCTCAACGATGATACCCATTCCGATGAAGCCCCTCGACGGCCT
CCGTTCGATAGACGGTACTTTGAGCGAGTATTAGGATTATCGCGTCCTCGTATCCAGATA
ACTACAGGAGGAGAAGATCGAGCACGCCGGGAAGCGTCACGTGAACTGAGACGCGAAGAG
CGGCGTCTCAGAATGATCCGAGCAGCCCCAGGAAATCTGTCATACTCTTCGTTCGGGCAG
GGTCCTCTTGTAAGACGACACCAGAGATGGTCTCCTCTTACTCTTGCCCGTGATCTACAG
ACGATTAGACGACCAGAGACAGCTTCAGGGCAAGCCTGGACTCGTGACACGGACGATTTG
ATCGCCAATCCCTCTGCTTCGTTGCGTGCTTCTCGGGACTCTGATTTCTTCCGAGAGCTG
TGGTGCGATGACGATGAGCAGTCTCTCATGTACTTCAACACCCTCTCCAGCGTCCATTTA
CCTAATGAGGGCGAGGAAGAGGAGGAAGAAGAAGACGAAGACGAAGAAGAGCTGACGGTT
CGTGAGAGTGATACGGAAGAGTTGTTTGCACCAGGCATTCTGGGCGGCTCCTCAGAGATT
GTGGACAGATTCATGCCTCCTCATCTACAGACTAGCCGTACCACAGCTCCTCTTCAGCCC
TCTATGGGTCGGTTTGTAGGGGGGGTTCAGTATGAGTCCCGGGCCTCGGGTCTGGATCTG
ACCGTGGTTGCTGGTCTTGATCGTCATGTGCGAGTGTTTGACATTTCGCAGCCGTCTATC
GCGTCTCGAGGCCGTCTGCTCTTTGATATTGCGTTCGAGTCTCGAATCACTTCGGTAGCC
ATTCTGGAGGTCAGTGAGGAGGACATTTGTGAAAAGACCAAGCGTGCCGCAAGTCCAGTT
TCCCGCGATACCAAGAGGCAGCGGGTTTAGCTCCGTTGTATATTTATAGCTAACATATTT
TAATAATGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21054g_CDS-001

Protein length: 650 aa.
Product: Conserved hypothetical protein

>YALI0B21054g_CDS-001 MKLLVCLENSGLLKEVKVSLATGDHKVRDVGFSEGSAVHVSKVIYDQRQYVALGRRDGSV
EVLDVEMGTPRRLYPAHREVFHPSELFASIDYAHNLLYTCTTGGMVTVRECKLDQTQTSD
ELLSTHHLGDAVSVLRPHPTQRGVVAFGGPQRVLEVAIIRTNRRNLWRSSKEEYIWISDV
RFTNVRGTSDNAEPGYSLVAVSRYGDAYIYQTNVSARPVRKIQVGDYPLTHLHMNHSLGG
DAFYVANSQNQVSLVDYDGQVRHKVCMPEGSVFLADFFSPATRQDPRVPQTEPIPSTSIS
RGDNLQSALWGELLMRRRQHTRQQQLQNQNQSTEPDPDADNTDHYVLNDDTHSDEAPRRP
PFDRRYFERVLGLSRPRIQITTGGEDRARREASRELRREERRLRMIRAAPGNLSYSSFGQ
GPLVRRHQRWSPLTLARDLQTIRRPETASGQAWTRDTDDLIANPSASLRASRDSDFFREL
WCDDDEQSLMYFNTLSSVHLPNEGEEEEEEEDEDEEELTVRESDTEELFAPGILGGSSEI
VDRFMPPHLQTSRTTAPLQPSMGRFVGGVQYESRASGLDLTVVAGLDRHVRVFDISQPSI
ASRGRLLFDIAFESRITSVAILEVSEEDICEKTKRAASPVSRDTKRQRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG