YALI0B20944g

Overview

Description weakly similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
Locus type CDS
Locus tag YALI0B20944g

Location

Species Yarrowia lipolytica Positions 2757491..2759807
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2317 (nuc.)
Previous locus YALI0B20936r Next locus YALI0B20966g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20944g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20944gYALI0B20944g_mRNA-001YALI0B20944g_CDS-001

Nucleotide sequence

 

>YALI0B20944g
ATGTACGCCGAGGACTACCCGTATCCCAGGTCGCCGAAGGAAACGACAGACTCGTCTGCC
GAGCCGGCCTCAGACTTAGCGTCTGTGTCAGCAGCCCCTCCAGCAGATGGCAACCCTGAA
GAAACGACGGCTCCGACGACTGCCACCTCGGAAGAAGACGACAAGAAGAAAAACAAGCGG
CGAAAACACAAAAAGAGCAGAAACGGCTGCTTCAACTGCAAAAAGCTCCGTATCAAGTGC
GACGAAAGTCACCCAGTGTGCAAGAACTGCCACCAGCGCCACAAAGAGTGTGTGTGGCCC
ACGGTGGCCAAGGCCAAGGACAGAGAGGGAAAGGCCTCCGAGCTGTCACCCACAGAGCTG
GCAGCTTCCGCCCTCATGCATTCCACCTCCAAACAGACCATTCGACCCACATCTATGGCT
CGAATGTTTGACGTGGACTTTGCTGACCTCGAACTGTTACGGTTCTACGTGGAACACACC
TCTCCTCAGCTGACCAAGAGCTGTGGGGACGCAGACTACTCTTGGGTGCGGTCCATCCCG
TCCATGACCATCGTCAACTCTGCATTGTACAAGTGTGTTCTCACTGTAGCATCCATCCAC
AAGGCTCACATGTACCTACCCGAAAAGTACACCTACGATCACGAGTACGCGCGCGAACGA
AAACGACTGCGAAAACACCTGGAAAAACGACGAGATAGAGAAAACCCGGGCGTGCCGATA
AAACTGCCACCACCAGACATGACCCGGGTCACAGGATACCTCAAGCCCAACTCGCAACTG
CTGGAGAAGATAGTCAAAGCCTTTACAGAAGCCCTGGCGGGACATAGACAGTCACTAGTG
ACCCTCAACGCCTCCAACCAGGAATCCATTCTGTCCACCTCCGTAGTCATCTTTATGATT
GCCCTCGCGCTTGGAGAACTGATTCCCCTCATCAACTTTGAAGGAGGAGCCGACGTGATT
GGAGTAGGAAGAGGCGTGATTGAGCTGGTGTTCCAGCTGTCGGCCAAGGATAGAATGGTG
CTATTCCCTCTACCTCCTCCCATGCCCAACAGATCATACCTTCCCAACGAACCTGTGCTT
TGGCAGCTTATCTCTACAATCCCCGACATGGGCCACCGACAAATGTGTTCTATGGAGCTA
CAACAGCTGATAGAGCTCTACAATCTGGACGTCAAACACCGGGGCCAATCACATCTTCCC
GGTTGGGCTACTTACATCTCTGGAGGCTTCCTGCAAGCTACTCGAGCAGGAGACCCGTAC
TGTTTGGTTATTCTGGGCCACTACTGCGCATTTGCGCACATGTCTCATTCATTTTTCTGG
CTTCGAGATCGTCTCAGTGGCGACTTGGAAGCTATCGTTGATGTGCTTCCTGAGGAGTTC
CATCACTATCTGGAATGGCCTCGTTCCATTTGTGGTAGATTCGACATGAACTACCAGGAT
CTTATTTCTGGCAGACTCCAAAAGCTGACCCTGGACGACAAGGATGAGAAGATCGAGCCT
GCTCACTCCGAACTGGGACCCGGGCCTTCCCAAGAAGGACACCAACAACACTATGACGGC
CCCATGCTTGATCTGTTGCAACAGCAACAACAACAGCAGCCCCAACAGCCCATCCCTCAA
GTGTCTCAACAACAGCAACTCGACCAACTGGACCAACAGCAGCTTACACAAGACCAGATG
CTACAGTCCCCACCAGAGCGACGGCAGTCCAACCACAGTCAACTGGGACTCTCCGACAAC
CAGGATCCACATATCCAACAACATATTCTTCACCAACAACAGCAGCAACAGCAACAGCAG
CAACAGCAGCAGCATCAACAGCAGCAGCATCAACAGCAGCAGCATCAACAGCAGCAGCAG
CATCAGCATCAGCATCAGCAGCAACAACCACAACAACACCATCAACATCAACAACCACAA
CAACCGCAGCATTCTGGAGATCTACATCACTCTGATCTGCCTCCACCTCCGGAGCAGCAG
ATTCCGGATATGGGAGATATGTATCAGTACAGCAACCCGGGTCCGTCAGGCCATGTGGAT
CATCATTCGCTAAAGATGGATCACAATTCATCAACCCACGGATCGATGCTTTCGTATGGG
CCTTAGTGGATTGCGACGATGCGGTTCAATGCATTTGTTTCTAGGATGGACAGGCTCACT
TCTTTGTCTTCCGTCTTGGAACAACAAATAACAGAGGCTTTTATTTAATCTCGGTTGTCA
ATGCCAAGCTCATTTTCGGGCTAGTCCTTATTTATTTGTATAATATGAAAACGAGATGTT
CTCTTCCTATATTTCGAATTATGGATATTGTATCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20944g_CDS-001

Protein length: 702 aa.
Product: Hypothetical protein of a 8-member gene family, conserved in the Yarrowia clade

>YALI0B20944g_CDS-001 MYAEDYPYPRSPKETTDSSAEPASDLASVSAAPPADGNPEETTAPTTATSEEDDKKKNKR
RKHKKSRNGCFNCKKLRIKCDESHPVCKNCHQRHKECVWPTVAKAKDREGKASELSPTEL
AASALMHSTSKQTIRPTSMARMFDVDFADLELLRFYVEHTSPQLTKSCGDADYSWVRSIP
SMTIVNSALYKCVLTVASIHKAHMYLPEKYTYDHEYARERKRLRKHLEKRRDRENPGVPI
KLPPPDMTRVTGYLKPNSQLLEKIVKAFTEALAGHRQSLVTLNASNQESILSTSVVIFMI
ALALGELIPLINFEGGADVIGVGRGVIELVFQLSAKDRMVLFPLPPPMPNRSYLPNEPVL
WQLISTIPDMGHRQMCSMELQQLIELYNLDVKHRGQSHLPGWATYISGGFLQATRAGDPY
CLVILGHYCAFAHMSHSFFWLRDRLSGDLEAIVDVLPEEFHHYLEWPRSICGRFDMNYQD
LISGRLQKLTLDDKDEKIEPAHSELGPGPSQEGHQQHYDGPMLDLLQQQQQQQPQQPIPQ
VSQQQQLDQLDQQQLTQDQMLQSPPERRQSNHSQLGLSDNQDPHIQQHILHQQQQQQQQQ
QQQQHQQQQHQQQQHQQQQQHQHQHQQQQPQQHHQHQQPQQPQHSGDLHHSDLPPPPEQQ
IPDMGDMYQYSNPGPSGHVDHHSLKMDHNSSTHGSMLSYGP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG