YALI0B20394g

Overview

Description similar to uniprot|P40051 Saccharomyces cerevisiae YER078c putative aminopeptidase
Locus type CDS
Locus tag YALI0B20394g

Location

Species Yarrowia lipolytica Positions 2691394..2692985
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1592 (nuc.)
Previous locus YALI0B20372g Next locus YALI0B20416g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20394g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20394gYALI0B20394g_mRNA-001YALI0B20394g_CDS-001

Nucleotide sequence

 

>YALI0B20394g
ATGCAACTAACTAATTTAATAGTCTCTAAGGTACCTTTCCACAACCACAGCATGATTCGG
GCACTGAAACACCTCAACCGGCTCCAGGGCGTGCGCTCCCGGTCAACTCTGGCCACCGGA
CAGCCCCTGTTTGAAACTCGGCCTCACCTGATCAAAAACGGAGACATTACTCCCGGTATT
CCTGCTCTGGAGTACTTTGAACGACGTCTTCGAGTGGCTGATGCTATGCCTGTCAAGTCG
TGTGCTGTGGTCATGGGAGCCACCACGAAGTACCGATCTGGTCCCGTTTTCTACGATTTC
CACCAGAACCCGGATTTCTTCTATCTTTCTGGCTTTCTGGAGCCCGAGTCTGCTCTGATC
ATTGAGAAGACCGGCTCCAAGCCTGACGATGTTGTCTTTCACATGTTTGTACCTCCCAAG
GACCCCCAGGCCGAACTATGGGGTGGTGCTCGCACCGGCGAAAAGGGTGCCAAGGATTTT
TTCAACGCCGACGAAGCATACTCCAACAACAACCTGATGCAGTTCAAGAAGATTGTGGAG
CGAAACGATACTGTATTCCACGACTCGCCAGATGTTAAGAACGTGGCTTCTATTTTCACA
GAGACAGTGGAGACCCCATTGACCCGAATGCTCACCCAGAAGCTCGTGTCCCCCCTGTCC
CCCATCATGACCAAGCTTCGAGCTGTCAAGTCGCCCAAGGAGATTGCAGTCATGCGAGCA
GCGGGTTCCGTTAGTGCCAATGCTTACAATGCCGCCTACGCCAACCCATTTGCCACTGAA
AAGGAGCTGCAGGTGTATCTGGAGTCACTTTTCCTACTGGGTGGATGCGACAAGCCTGCC
TACGTTCCTGTCATCGCTGGAGGAGCTAACGCTCTGTCGATTCACTACACCCGCAATGAC
GACAAGTTTGGAACCAATGATCTTGTTCTTGTTGATGCCGGAGGACAGTTTGGAGGCTAT
TGCGCTGACATCTCTCGAACATGGCCTGTTGGAAAGGATAGCGAGGGTAAGTTCACCGAG
GCCCAGAGAGACCTGTACGAGGCTGTTCTTGATGTCCAGAAGCAGTGTATCAAGGAATGC
AGCACTGACAAGTCCATCAATGATATCCACGAGATTTCTGTGCGAAAGCTGCACAAGAAC
CTGCAGAATGTTGGATTCAACGGCATCACTCTCAACCAGACACAGACCCTGTACCCCCAC
TACATTGGCCACCATCTGGGCATTGATCTGCACGATGTGGGCAAGAGCAACCGACGAGCC
AACCTGCAGGTTGGTAACGTCATCACCATTGAGCCTGGTGTGTACGTGCCTTATGATGAC
AAGTACCCCAAGCACTTCCAGGGTATCGGTATTCGAATTGAGGACAATGTGGCCATTACC
GATAAGGGCTACTCTGTGTTGACCGAGGAGTGCCTCAAGGAGGTGGACGATATCGAGGAG
CTGACTCAGTTGGCTTATATGAACTAAGGGTTTCGCAAAATCTGGAATATAGGTATCGGG
GCTCGGCTCTGTAGTCATCCGGTTGTATTCCAAACGCAGAACATCACAGCTATAGACTCA
GTGTGTAAATAATGACGATGGTAATGACCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20394g_CDS-001

Protein length: 489 aa.
Product: Mitochondrial aminopeptidase, putative

>YALI0B20394g_CDS-001 MQLTNLIVSKVPFHNHSMIRALKHLNRLQGVRSRSTLATGQPLFETRPHLIKNGDITPGI
PALEYFERRLRVADAMPVKSCAVVMGATTKYRSGPVFYDFHQNPDFFYLSGFLEPESALI
IEKTGSKPDDVVFHMFVPPKDPQAELWGGARTGEKGAKDFFNADEAYSNNNLMQFKKIVE
RNDTVFHDSPDVKNVASIFTETVETPLTRMLTQKLVSPLSPIMTKLRAVKSPKEIAVMRA
AGSVSANAYNAAYANPFATEKELQVYLESLFLLGGCDKPAYVPVIAGGANALSIHYTRND
DKFGTNDLVLVDAGGQFGGYCADISRTWPVGKDSEGKFTEAQRDLYEAVLDVQKQCIKEC
STDKSINDIHEISVRKLHKNLQNVGFNGITLNQTQTLYPHYIGHHLGIDLHDVGKSNRRA
NLQVGNVITIEPGVYVPYDDKYPKHFQGIGIRIEDNVAITDKGYSVLTEECLKEVDDIEE
LTQLAYMN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG