YALI0B20262g

Overview

Description some similarities with uniprot|P25357 Saccharomyces cerevisiae YCR033w similarity to nuclear receptor co- repressor N-Cor
Locus type CDS
Locus tag YALI0B20262g

Location

Species Yarrowia lipolytica Positions 2667523..2674312
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 6790 (nuc.)
Previous locus YALI0B20240g Next locus YALI0B20284g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20262g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20262gYALI0B20262g_mRNA-001YALI0B20262g_CDS-001

Nucleotide sequence

 

>YALI0B20262g
ATGTCGGGCAACTATCCGTCGTCGTCTGCGCAAGATGTGCGACGTCTGGAGGAACGCGAC
AAGGAGCGTCGCAGAAGAGAACGCGAGGCTGCCGAGTACAAACGACAGAGGAGGGAAGAT
GTGAGTACCCGAGAGACATGAACGAGAGCCTAGGTTGAGTGAAAGCGGAGAGAAAAGTGT
GACAAAAAGGTGGGTTGACGGGTGTAACTAGAGGAGAGACGCGGGCAGTACACTGAGCAG
GCGTTCTGAGCACTATGGCGTGTTTTTAGGGGCTAAAATGAACAATTCAAGATGATGACT
AAGATGATACCAACGTGATACCAAGGAGAGAGAAAAGAGATGAGAGGGCGAAACGGGCGA
CAGCCTTGAAGCGAGTGGCATTCGAGACGCGAGCACGTTCCTTGACGTTGGTATTGAGGA
CAACATGGTCCATGTTTACGTGGCATTCTGAGATACCATCTGCATTCATTCAGGTCACGC
GATACCCGATGTTTTTAACAGAACATGGATGTACCGTCACGGCGCCACCAAATTTCCATC
ACTTACTGTTCAGATTCTGCCGTTCAAGTCCATGTTGAACAGTTGCTGTTCCGTGTTCCG
ACTCAGATACAGCAGCGCATGCAGCCCAGGTCCCAACTGCTTGAGCCGCAGATATTTGAC
CAAGCATAGAGGGGAGGATGTGTCACAGTACCTCAACGATCCAAATCAGATGCAACCCAA
ACGATCGAAAAAAGGTAACATTGCAATACCATTCTGTTATACGTCAGATACCCTACCTCA
TCTATGTACGAGTTCACACCATCAACACCAACATCACTACCGGCTGTGGACCAACGCACC
CAGAACTCTACTTCTGTGCCACCTTTACATTGTGTGTAGGCCACCAATCGACACTTCTGG
GGAGCTTCGAGTGAGACTTTAGATGCAATGCTACCACTGCCACCGTTACAGTTGTCTCCA
CCGTCGCTGCTGTCATTGTGCTGCCCTGCACCCACTGACTATCATGTCTGATGTGAGTAG
GGACTGCTTCTGTTCCTCACTCAGACACTCATGCTGTTTTTGCTACAACCACAGTACCCT
CGTTGCAAGATCCATAACCTTTACTAACACAGAACCGCCGTTTTGACGACCGCCGACGAT
TCGAGCGGCGCCCACCAGGCCCTAACTTCAAACAAGAGATTCCCACAGGTCCCCGTAGCC
TGACAGGTAAACGAGACAACCGGGGCTATCGCGGCCCACCAGGAGGAGGAGGCCCTCCTG
GACCCGGAGGAGCAGACCCGCGTTACCAGGGCAACACACCACCGCGCTTCGACCGCCGCT
GGGACGACCGCCGGTTCGACAACCGACGCCGTTACGATGATGGTCCAGGAGGAGGATCTA
AACGAGACTCGCGGGGAGGCGCCGAGAGAGATCCACGCGACCGGCCGGATCCACGTGACC
GACCTGATCTACGAGACCCACGAGACCGGCCCGATCCTAGAGATCGAGGAATCGACCGAC
CAGATCCTCGGGACCCACGTGACGCTCACTCGCGCGACCGGTCAGATTCGCGCGGTGATC
CACGTGATCTTCCGCCACGAGACCGGCCAGATTTGCGGAGCGACCCGCGTGACCTCTCAC
GTGACCGTGTAGAGGATGGCAGTGTGTCACGTGTACCTCCTGCGGATGACTTGTTCCCGC
ATTTTGTCAAAAACGAGTCGCCGAGCGTGCCGCCCGCAGTTGCAGCTTCTGCAGCGGCCT
CAGCTTCCAATTCGGTGTGTAACTCACCGAGTGACGAGCGAAGGTTTTCACGCGACACCA
GGGATGCACGAGATTCCTTATCACGTGAGTCGGTGCGTAAATCGCCCCTTCCACGTGACC
TGCATCGCTCCGCGTCCCCAGATGTCGCAAGTCCTGCTAGAAACGGTAGCAGGCCACTGA
GGAAGCCGCATCAAAAATCTCTCCCAAAGCACGCCTCATCGCTTAGCCACCAACATGATC
TCCACACATACTCCGACACGCATCCTGAGGAGCCTGAGGAGATTGCTCGCAAGAAGGGCG
TCGAGGTGAAACACGACGACTCCAAGAGGGTCAAGGAGCTCAAGGAAGAGGTCAAGAAGG
AGGGTAGGCAACTCAAGGCCGACACGCCGGGTCCCGCAGACATTGCCATGCACGAGGATC
CAGTGATTGAAAACGGCAAGGAGGAAAAGGTGGTGAAGAACGGAACAGACCATATTGCTG
AATCGATGCCGCCAAAAACAACCGAAAACTATGTACAAAAGGAAAAGATGGCATCGACGG
ATGGCAAGGTCAAGGAGGAAAAGGTAAGGGAGGGTAAGATCAAGGAGGATAAGGAGGTCA
AGGAGGACAAACGGCCCAAAACACAATCAGATAAGCCTACAGAGGCTAAGAAGCCGATGG
AGAATCATGTGGAGTCAAAGGTTGATGCGAAGGCTGAGACGAAGGTTGCAGAGAACAAAG
CTGCAGACACCAAGACTGCGGAGGCGAATGAAGCTGACAAGCCCTCTGCTGTTGAGAAAT
CTGAAGCGGCAGCGGAGGAAGTCAAGGAGAAGGTCAAGGGGCCTATTAAGGAGCCTGTCA
AAGAGTGTGTCAAAGAGGAAGCCAAGACTAAAGAGCATGCAAAGGAGTCCTCAGCTCATG
GCACTTCTGATGCTCCTACGATGGCTGCAGTATCTACTGTTACACCCACACTGACCACGA
GCGCTAAAGACAATATTCTAATAGCTGATGCTGCTCCGAAGGCTGCTCCCAAGACCACTG
TCGAGACCTCCACTCCTACTGTCGCAACTAATGAACCCTCCACAGCTCCTGCTACGGCAG
AGAAACCGCCTATCACTGAAGCTCCCTCCGCTGCAGTTGACGACGACATGGGCGACGCTC
TTGAAAAAGAGCTTGAGCTCGAAATGCAAAAGCTGGAGGAGGAGATGGAGGTCGAAGAAG
AAGCAGCCGTTGCTGCCGCTGCCACCTCTGCCTCCGTGTCTCCCACCACAGCTCGGTCTC
TTGCTGCCACCTCCATCGAGACTCTTCCTGTGCGGTCAATTTCACTGCCCACGGTTCCCC
CTGTTTCCCAACAACAGAGCCAGCGTCTTAGTCTTCCTGGTGGCCTTGCTTTACCTGGAG
CTACTGGAGCTACTGGATCCACGGCAGCCACTGCATCTACCGTCACACCTCCAGTAGATC
CTGCCCCTGTGACAGAGGACGTGGTGATGAAGGATGCGGTTCTGGAGAGGGCTGTTGATG
CTGTTGAAGCTAATGAGGCAGCAGCAGCAGCAGCAGTTGCCCATGTCGAGTCTGACAAGA
TGGACGTGTGCCTTGAGCCAGAGTCGAAGGAAGAGCCTGAAAAGATGGATGTCAAAGCAC
CTGCACCTGCAAAGGTGACTTTTGCCGTTGAAGAGAAACTCGAATCTCTCGTTGACAAGG
AGGAGACTCCTGCTGCTCCAGCAGTGAAGGAGGAACTCCCTGCTGCAGTTGGGGATGGAG
TGTCTCCGCGTACAGCTACGGTCGGCGTACGAGGCCAGGAGACAACCCCCACAGCTGTTG
TCACCAAGAAGGCAGAGCCAGTTGCTGCACCAGTTGCTGTCTCACCGGTTGTCATAACAG
CTTCCATCGACTTCCAGCCTGACGAGTTCCCCATGACCCGGCTGGAGAACACCTACTTCT
CTAACCGTCTTCTTCCCCGCTCCGAGCGTGTTGCTGAGATGCGGTACCTCCGGTCTATTC
CTCTCAAGTCTACACGTGACTACAAGTGTTACAGGACCAACACGCGCAACTTTGCCGTGA
TTCAACCTCTTCTTGCTGCCCGCATTTCTGACCGCAACAAGGCTATCTACGCCAAGAAGA
AGCAGCTGCAGCAGGAGTACATTAGCAAGTACCGTCTTTGGAGCAAGCAGCACGTGACGC
GGTCGCAGGACGAGGAGCAGGCCGTCTCCAAGGCCAACCAGCAAATGCCTCGCCCTGAGC
AGACTACCGGCGACAAGGGAATTGCTCTTCCTGGTAGCAGTGTCAATGGGGCCCCCAAGG
AGTCTGAGAGCGGGCTCGAGGAGAAGGGCAGTGAAAAGGGTTCTGCCGAAGATGTGGCTG
CGGGACGACGTGGCAGACACTCTCATGGAGACACCGTCCGTTCCGAGGCCGAGTTTTTAG
AGATCCTTGCCAACCTCGAACGGGAGCATGCACGTGACCCGTCAGTGCGTGCAAAGCTCA
CCTCGGCCACCATTCCAGACATGATTTTGGACGAGGAGCTGCGTCAGAAGGTGTTCTTCG
TGGATACTAACAACTTTGTGGCCGACAAGCAGGCGTTCCATCGACGCCTAGATGTGGACG
GCATTGACAATTTCACTGCTGCCGAACACGAGCTGTTCTGCGAGGCGTATGCTGCTCATC
CCAAGCAGTTTGGTCGTATTTCTGCTGCCATGGGCGGTCTGCGGACTTTCCGAGACTGTG
TTTTGCATTACTACAGAACCAAGACACGGGTGGACTACAAGGCTATCGTCGCGGGGCGTA
ACAGACGGTCTGCCAGAAAGGGCAGACGGAAGAAGGACGTTGTGGATGAGATGGCGTTCG
ACGGAGCCATCAGAACCAGACGAGCGGCAGCTCCTCAGTTTGGAGAGGAGGAGAGGAAGC
GGCAGATGGAGGGCGAGAAGCGGGAAGTCAAGAGAGTCAAGGTGGAGCCTTCAGTTGGGA
GTGTGGCGTCAGGCGGGGGTATTGCTGTAAATACCCTGCCTGCGACTACAGTTGGAGAGG
CTGGAATTGGTGTGGCTGATGCTGCAGTTGTAGTTGCTCCAGGAGCAGTTGCCAATGCAG
CTCCTGCTCCTGGTGACTTCAAGACCTCTTCATATTGGTCTGTCAACGAAGTCAACCTGC
TACCCATTCTAATCCGTTCCCATGGCACCAACTGGGAACAGGTAGCTGCTCACTTCCGTT
CCAAGTCCGCCGTGATGGTGAAGAACTACTTTCACAAGCACGGTGAGGCCAAAGGGTGGC
ACGGACTGGCTATTGAGGCTGACGAGAGGGCAAAGAGAGGTGAACCCCTGCCTCCTCCCC
CTCCCATTAAGCAGTCTTTGGAGTTGACCACTCCCTACGCGGGACTGAGAAAGAAACGAG
TGAGTCCAGAGCTGCAACTCGAGCGGCAGAGACAAATGCCCGAGCAGGAGCAGATACGCC
AGCAGACTGTTCAGCCTCAGGAGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAACAGC
AGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGC
TGGAGCGTCAGCAGAAGCACCAACAGGAGCTCCAGCGTCAGCAGGATATGCGACAACACC
AGACACCTGCCCAGCATCAGCAGTCTGCCCAGCAGCAGGAGCTCCACAGACAACAGACTA
TACAGCATCAGCAGTCTGCCCAACAGCAGCACCAGCAGCAGCAACATCAGCAGCAGCAGG
AACTTCAGAGACAACAGCAGTCTGTCCAACACCAGCACCAGCAGTCATCTCAACCGCCTT
CTGTGCAGCAGTCTCAACCTCAGCAGGTTCCTCAGCAGGTGCCCCACCAGCCTTCTGCTC
CACAGCAGCAGCAGCAGCAGCCCCCAGTCTCTGCTCGGCCTTCTCAACCTGCCCAGTCTC
TGCATTCTCGGTCAAGTTCTCAGTCCTCTACAGGCACTCCTGGTCCATACAGACCTGTCG
CTATCCAGCCCCAACCCCAGCATGTTTCTCAGCAGCAGCCGCACGTGTCTCAACCCCAGC
ACGTGACTCCCGCTAGCGGTTCACCCCAACAGCAGTACATTGCTACCCACGGACGAGCCG
TTTCGTACGACTACGATCACGTGCGTGACCCTGTGGGCTCCATGCGGTACTCTCCCCATG
GAATGCGACCTGCTACCGAGTCAATGCGACACATGCACTCTGCTTCGCCGCCGCTTGGCC
AATCTGCGCGACAGTCACCTCAGCCTGGACCTCCTCCCATGGCCGGGTTCTTTGCTACCA
AGCCAAGATCCTCGTCTTTCAAGCAGGAGCGACCCAATCTGGAGCGCCAGCAACTGGAGC
GCCAGCGACAGCTGCAGGAGCAGGAACAGGTGGAGAGACAGCGACAGTTGCAAGACCAGC
AGCTGGAGCGACAGAGACAGCAGCAGGAGCAGGAGCACAGACAGCGACAGCAGGAGCAGG
AGAGACAGCGACAGCTGCAGCAACAGCAGCAACAGCAGGAATTCCAGCGCCAGCAAGAGT
TCCAACGCCAAGAGCTGCAGCGTCAACAGGAGCTTAAACGACAGCAGGAGCTACAGCGTC
AGCAGGACCTCCAGAGACAAGATCTTCAACGAAGTACCTACTCACCTTACATGCCTCCGC
TGTCGCACACGCCTCCGCCACAGCAGAGCTCTCCCACTGGGTTTTCTCTGCCGCCCATCA
ACGCTCACACACCCCACGGGCCTCGGCAGACACTGCCGCCCTTGCCGATTCTGCAGCGGC
CTTCGAAGACGTCGTCGATCACGTCGATTCTCAATGGCGATTCAAAGCCGAGTGGAGGAC
GTCCTGGAGGAATCACCCTGCCGCCTCTCAATGCCATGGCGGGTCCTCCTTCGGGTGCTC
CCGGCGCGCCCGGCGCTCCCGGCACTCCCGGAGCTCCTCCAGGCATGTATCCTCCACGAC
AGCAGTCACCCCCAGGACCTTATCCACCTTATTGGCAGTAGAGAGGGGAGAGGAGGACAC
GAAGGACGGAAGGATAGCATGGATAAAGCGTGTTTATTTATATGTATTATATGAAGATTT
AATTGAGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20262g_CDS-001

Protein length: 1903 aa.
Product: Conserved hypothetical protein

>YALI0B20262g_CDS-001 MSGNYPSSSAQDVRRLEERDKERRRREREAAEYKRQRREDNRRFDDRRRFERRPPGPNFK
QEIPTGPRSLTGKRDNRGYRGPPGGGGPPGPGGADPRYQGNTPPRFDRRWDDRRFDNRRR
YDDGPGGGSKRDSRGGAERDPRDRPDPRDRPDLRDPRDRPDPRDRGIDRPDPRDPRDAHS
RDRSDSRGDPRDLPPRDRPDLRSDPRDLSRDRVEDGSVSRVPPADDLFPHFVKNESPSVP
PAVAASAAASASNSVCNSPSDERRFSRDTRDARDSLSRESVRKSPLPRDLHRSASPDVAS
PARNGSRPLRKPHQKSLPKHASSLSHQHDLHTYSDTHPEEPEEIARKKGVEVKHDDSKRV
KELKEEVKKEGRQLKADTPGPADIAMHEDPVIENGKEEKVVKNGTDHIAESMPPKTTENY
VQKEKMASTDGKVKEEKVREGKIKEDKEVKEDKRPKTQSDKPTEAKKPMENHVESKVDAK
AETKVAENKAADTKTAEANEADKPSAVEKSEAAAEEVKEKVKGPIKEPVKECVKEEAKTK
EHAKESSAHGTSDAPTMAAVSTVTPTLTTSAKDNILIADAAPKAAPKTTVETSTPTVATN
EPSTAPATAEKPPITEAPSAAVDDDMGDALEKELELEMQKLEEEMEVEEEAAVAAAATSA
SVSPTTARSLAATSIETLPVRSISLPTVPPVSQQQSQRLSLPGGLALPGATGATGSTAAT
ASTVTPPVDPAPVTEDVVMKDAVLERAVDAVEANEAAAAAAVAHVESDKMDVCLEPESKE
EPEKMDVKAPAPAKVTFAVEEKLESLVDKEETPAAPAVKEELPAAVGDGVSPRTATVGVR
GQETTPTAVVTKKAEPVAAPVAVSPVVITASIDFQPDEFPMTRLENTYFSNRLLPRSERV
AEMRYLRSIPLKSTRDYKCYRTNTRNFAVIQPLLAARISDRNKAIYAKKKQLQQEYISKY
RLWSKQHVTRSQDEEQAVSKANQQMPRPEQTTGDKGIALPGSSVNGAPKESESGLEEKGS
EKGSAEDVAAGRRGRHSHGDTVRSEAEFLEILANLEREHARDPSVRAKLTSATIPDMILD
EELRQKVFFVDTNNFVADKQAFHRRLDVDGIDNFTAAEHELFCEAYAAHPKQFGRISAAM
GGLRTFRDCVLHYYRTKTRVDYKAIVAGRNRRSARKGRRKKDVVDEMAFDGAIRTRRAAA
PQFGEEERKRQMEGEKREVKRVKVEPSVGSVASGGGIAVNTLPATTVGEAGIGVADAAVV
VAPGAVANAAPAPGDFKTSSYWSVNEVNLLPILIRSHGTNWEQVAAHFRSKSAVMVKNYF
HKHGEAKGWHGLAIEADERAKRGEPLPPPPPIKQSLELTTPYAGLRKKRVSPELQLERQR
QMPEQEQIRQQTVQPQEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLERQQKHQQEL
QRQQDMRQHQTPAQHQQSAQQQELHRQQTIQHQQSAQQQHQQQQHQQQQELQRQQQSVQH
QHQQSSQPPSVQQSQPQQVPQQVPHQPSAPQQQQQQPPVSARPSQPAQSLHSRSSSQSST
GTPGPYRPVAIQPQPQHVSQQQPHVSQPQHVTPASGSPQQQYIATHGRAVSYDYDHVRDP
VGSMRYSPHGMRPATESMRHMHSASPPLGQSARQSPQPGPPPMAGFFATKPRSSSFKQER
PNLERQQLERQRQLQEQEQVERQRQLQDQQLERQRQQQEQEHRQRQQEQERQRQLQQQQQ
QQEFQRQQEFQRQELQRQQELKRQQELQRQQDLQRQDLQRSTYSPYMPPLSHTPPPQQSS
PTGFSLPPINAHTPHGPRQTLPPLPILQRPSKTSSITSILNGDSKPSGGRPGGITLPPLN
AMAGPPSGAPGAPGAPGTPGAPPGMYPPRQQSPPGPYPPYWQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG