YALI0B19558g

Overview

Description similar to uniprot|Q12009 Saccharomyces cerevisiae YDL201w strong similarity to probable methyltransferase related protein Neurospora crassa singleton
Locus type CDS
Locus tag YALI0B19558g

Location

Species Yarrowia lipolytica Positions 2579721..2580768
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1048 (nuc.)
Previous locus YALI0B19514r Next locus YALI0B19580g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19558g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19558gYALI0B19558g_mRNA-001YALI0B19558g_CDS-001

Nucleotide sequence

 

>YALI0B19558g
ATGTTGAAACGAGATCAGAGCGAAATGGACATTGAGGCGGAGACTGCTAACATGGGAAAG
GAGGAGAAGGAATCCTTTGTGCACAAGCGACAAAAGTACCGACAAGAGCAGGAGGAGAAG
CGACTGGCAGCCAAGAAGGGAGTATCCTTCGAGCAGCCCGAGGACGGCGAGATCAAGCTC
CCCAAGAAGCGATACTACAGACAGCGAGCTCATTCGAATCCCTTCTCTGACCATCAGCTG
GAGTATCCCGAGTCGCCCGCCGACATGGACTGGGACGTACTTTACCCCAACCGAAAGGAA
GGCCAGAAGGTCGAGGTGGCAGACATTGGATGTGGATTCGGAGGCTTGCTGGTTGCTCTC
TCCCCCCAGCTGCCCAACCAGCTGATCCTGGGAATGGAGATCCGAGTGCAGGTTACTAAC
TACGTGGAGGACCGAATTGTGGCTCTTCGACACCAGAACAAGGAGACCGACGGCTATCAG
AACATCAGTGTTCTGCGAGGCAACGCTATGAAGTTCCTGCCCAACTTCTTCGAAAAAGGC
CAGCTGTCCAAGATCTTCTTCTGCTTCCCCGATCCTCACTTCAAGCAGCGAAAACACAAG
GCTCGAATCGTCACCACCACCCTGTGCTCCGAGTACGCCTATGTTGTGCGACCTGGAGGA
ATCGTCTACACCATCACCGACGTTAAGGATCTGCACGAGTGGATGGTCAAGCATTTGGCC
GCTCACCCTCTATTTGAGCGACTGACCAAGGAGGAGGAGGACGCTGATCCTTGTGTGGCC
ACCATGCTGGTCGAGACCGAGGAGGGCAAGAAGGTGGCCCGAAACGAGGGAGATAAGTTT
GTTGCATGCTTCCGACGAAAGGAGAACCCTGAGTGGTAAGGAAGCGGAAGTGACCTGCGG
CAACTACTGGCCAAAAATGGACAAGGATGTATGTACTTTTACAGAACAACATCCTATGTA
GATCATGATGTGGAGACCCATAGGCGAGGAGGAAAAGGATATGTAAGATAGATTGATTAT
TGTGTTTAATGAAGGGTGTATACAGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19558g_CDS-001

Protein length: 293 aa.
Product: Noncatalytic subunit of a tRNA methyltransferase complex, putative

>YALI0B19558g_CDS-001 MLKRDQSEMDIEAETANMGKEEKESFVHKRQKYRQEQEEKRLAAKKGVSFEQPEDGEIKL
PKKRYYRQRAHSNPFSDHQLEYPESPADMDWDVLYPNRKEGQKVEVADIGCGFGGLLVAL
SPQLPNQLILGMEIRVQVTNYVEDRIVALRHQNKETDGYQNISVLRGNAMKFLPNFFEKG
QLSKIFFCFPDPHFKQRKHKARIVTTTLCSEYAYVVRPGGIVYTITDVKDLHEWMVKHLA
AHPLFERLTKEEEDADPCVATMLVETEEGKKVARNEGDKFVACFRRKENPEW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG