YALI0B19316g

Overview

Description similar to uniprot|P09230 Yarrowia lipolytica XPR2 Alkaline extracellular protease precursor
Locus type CDS
Locus tag YALI0B19316g

Location

Species Yarrowia lipolytica Positions 2551458..2552819
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1362 (nuc.)
Previous locus YALI0B19272r Next locus YALI0B19327r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19316g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19316gYALI0B19316g_mRNA-001YALI0B19316g_CDS-001

Nucleotide sequence

 

>YALI0B19316g
ATGAAGGTCACGTTTTTCATGCTGGCTGGAGCGCTGGCTTTGCCCTCGGACTATGAGAGG
GCCCAGGCGGTTTTTTCACGGGCAAAATCGTCGTTTGTGCAGTCTTCCACGCTCAACGAC
CGGTACATCATCACTTTCCACGAGCAGCGGATCGATGAGAGTGCGGACCAGCTGGAGAGT
CTGGAAGCGACCGTCGACTTGACCACCGCCGATTTGCAACCTCTGGACATTCCTGCTTAC
CAAGGAGCTGGCTTGATAGGATACCACGGGCTGTTTGATGACTCTACAGTGGACCTGCTG
CGGTCTGATAGTCGTATAAAGGCAGTTGAGAAGGACTTTGAGACCCATATCACGGCTAGT
GGGCCCATTCCAGCTAACATCAGTTACTCTGGTGAGCCTGAGACTGCTCCAACCTACGAG
TGGGGTCTCTCTCGAATCTCCCATAGAGATAACCAGGTCAACCGGACGTGCCTGGTAAAC
TGTGAGGGCAGAAGCTACCAACGTCTCAAGTCCAAGCACCAGACAGTCATCTACATTGTC
GATACCGGTGTGAGAGTATCTCATGAGCAGTTTGGAGGACGGGCTATTCGAGTCAAGAAC
TTCAACCCTTCTGAAGACGATGAAGATAACAACGGCCATGGAACTCATGTGGCTGGAACA
CTGATTGGGTCTCGGTACGGCGTTTCAAACACCCATTCAACCCTCAAGGTCGTCAAGGTA
TTTGGCAAGAACGGAGCTGCTCCTGTCTCTAATATCGCCGCGTCTGTCGCATGGGTGGTT
CAAGACCATCTTGAGAATCCCGGTCAGCGCGCAGTTCTTAACTTTTCAGCGGGAGGACCT
CGAATTGCTGCCTATGATCGAGTCTTCCAACATGCTGTCAAGTCTGGGCTGGCCGTTGCT
GTGGCGGCTGGAAACGGACAGAGAGACGCATGCACTTTTGGACCGGCTAACAACGGAGAA
ACCCTCAAGGGACTCGTGGTTGTCGGAGCAACAGACATGTGGGACAATATTGCTGTGTTT
CCGACCTGGTGGGGATCCAACTGGGGAAAGTGTGTCAACGTGTTCGCTCCGGGCGCTTAC
ATTGACTCCACTTATAACACCAGTGATAATGCAACCTTCAGCAGCTCAGGCACGTCAATG
GCTGTTCCTCATGTGGCTGGTCTCATGGCGTACTTCCAGTCTGTCATCGACACTCCTCTG
TCTCCTGCAGAGTTGGAGGGTCTCGTCACGGCGGTGCCTAACTACGTTAGAGGGGAACTC
AATGGAGCAGCTAATGTCCTCGCTAATAACCGTTTCCAGGAAGCGAAAACGAATGTTACT
TTGCCTTGGTGGAAGAGACAGGTCCACGGGCATAGCGAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19316g_CDS-001

Protein length: 454 aa.
Product: Alkaline protease, putative

>YALI0B19316g_CDS-001 MKVTFFMLAGALALPSDYERAQAVFSRAKSSFVQSSTLNDRYIITFHEQRIDESADQLES
LEATVDLTTADLQPLDIPAYQGAGLIGYHGLFDDSTVDLLRSDSRIKAVEKDFETHITAS
GPIPANISYSGEPETAPTYEWGLSRISHRDNQVNRTCLVNCEGRSYQRLKSKHQTVIYIV
DTGVRVSHEQFGGRAIRVKNFNPSEDDEDNNGHGTHVAGTLIGSRYGVSNTHSTLKVVKV
FGKNGAAPVSNIAASVAWVVQDHLENPGQRAVLNFSAGGPRIAAYDRVFQHAVKSGLAVA
VAAGNGQRDACTFGPANNGETLKGLVVVGATDMWDNIAVFPTWWGSNWGKCVNVFAPGAY
IDSTYNTSDNATFSSSGTSMAVPHVAGLMAYFQSVIDTPLSPAELEGLVTAVPNYVRGEL
NGAANVLANNRFQEAKTNVTLPWWKRQVHGHSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG