YALI0B19184g

Overview

Description some similarities with uniprot|K5VPX1 Phanerochaete carnosa hypothetical protein PHACADRAFT_259928
Locus type CDS
Locus tag YALI0B19184g

Location

Species Yarrowia lipolytica Positions 2532900..2535095
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2196 (nuc.)
Previous locus YALI0B19162g Next locus YALI0B19206g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19184g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19184gYALI0B19184g_mRNA-001YALI0B19184g_CDS-001

Nucleotide sequence

 

>YALI0B19184g
ATGCTCACCCTACAACAAGTGGTCACATGGCTCAAGGGCGTGGAACTGTACTCCAAAGGA
GACTATGCTCCAGCTCTCAAGCAGTTCAACCAGCTCATCAACTCGCCAGAATACTCTGGA
GAAGTCAGCAAGGTGGCCCACAACATTGCCGCCATCTACTACAAGATGGAGGACCACGAG
CGCGCCACAAAGTGGTTCGTTACAGCTCTCCAGAAGGACCCGTATCTGTGCATCACTCAT
TTCCTGTTTGGACAGTGTCTGTTTGAGCAGGAAAAGTACTCGGAAGCCGCCAAGGAGTGG
GATAAGTGTCTGGAATACATGCGAGGCAACACCTGGATCAACTACCAGCCACTAGGCCTC
AACTTCACCCTCTACAGCTGCGAGGTCATGTTCAATAAGTCCATGGCCAAGATCTACAGT
GGCGATATTCTGCCTGGAGTGTCTGACCTGTCGCGAGCCGGCAAGGAACACAAGTGGTCC
GCTGATCACAACAGAATCGACAAGGCTTACATTTACTTCAACGCCATCAAGGACTCCTTG
CATAGAGCCACTCACACGACCAAACAGTCCCAAAACGACGGTCTTCAACGGTCCAAGTCT
TTGTCTCGATCTAAGAGCCAGAACCTGTCGCGATCCAAGTCGCTGGCACGATCCAAGTCG
ATGAAACACAAGCAGCAGCAGCTACAGGACAATATTCGAAACCGGTCGTCGATGGGATTT
GGAGCGAACTACACCAACACCTTTGATGTGTCTCAAGCCGAAAAGGAGGCTGCTAAGCAA
CTTGCCCAACAGTCTAGTGGCAATGTTGGACCCGTGGGGTTGGGTATCAGACAGTCTCCC
AGTATGCGAGGTTCTCCTGCTAATCGACCTTCACCCAATTTCAACAACAATGGCGGTACT
CCTAACTTGGGCCGTTCTCAAACGTTGGGAGGAGGAGGTCATACCCAATCCAGCCAGCTA
CACCGAAGCCAGACGACTGGCCATGCGCACTCTGTTGCAGAACACCCCCATTCGTCGGCA
AATGTGCATCGAAGCCAGAGCACGAGAGCTCCCGTCACAGGCACCTCCACCACGGAGGTG
GACCTTCCCTCCACTGTCAAAATGGCTCGAATGAATGAGACGTACAAAATCTACCAGATT
TCGTCCGAGTTCTGCCTCTTCTCCATCCACGACAACCGTCTCAAGAACATTGTTGGCTGC
GAACAAATGGCTTCTCTGCTCCGAGGTAAAGATAAGGAGATTTCTAGTGGCGGAGGCGTG
GTTGGAGCCTCGTCTCCCCCTCCCGAAGACTCCACCGAGTTCTCCTTTGTCGAGTCTGTC
GGCCGGTCCGACGACGTAGATGACATCTACGACATTGACGACTACTACGGAACTCCCCCC
GCGTCTACTGGCCAGAGATCCGCCAACCAGTCTGTGAACCGTTCTGGAGGTTCTATCAAG
TCAAATGCCGCCACGGTGGCCACTGGATCGCCTCCCGCAAGGTCCAAGCCCACTCCTATC
GACGTGGATCTTGCTCGAGAGATGCGCAAGGTATCATTTGACTCGTCTCTGTCTACCCCC
AAGCTCAACAAGCTGGTTGACAAGATCCAAGGCACCACCCGAGACTCTGTGTCTTCTACA
GATTCCATCCATGCACCCAAGGCCACTAAACACCGCGTCCAGATCAACTACATTCGTCCA
GTGACTGCCAAGGTGTGTTCATTTGTGGCTGAAGAGTGCTCCTCTCCCGATACCCCCATC
ACTCCCATCCCCGTAAAGAAGAAGGCTGTGAAGGACTACTCCACAAGATCACCCTACCCT
GATTCGGTAGCCTCGTCTTCCTACGAAGACGAGACAACTTCATGGAGCAAGTCTCTTCCT
CTGCTTCCCAACGACCACGCGGCTCACAAGACCGACCAACGTCTCAGAGAGCTGCGGGAA
CGTGATCGGCGAGAAATAAGAGACGGGTTCATCGACCGAGACACAGGAATGACCCCTCCC
CAGAGCCACCAGTTCGATCCCACAAACACCGTGGCGCCCGGAAGAAGCAGAAACACAAAG
TTTCTGACGGTTGACCTCGACGACCCCAACCACCAGGGGAACAATGGCCGGTCCAAGAGC
CCAGGTTCTCCCATGTCTCCCTTTATTCTTGTCACCTAGCTGCAGGTGGTTGGTGACAAG
TGTGTAAATCTATAAGTTATTGTATTAGTAAGATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19184g_CDS-001

Protein length: 713 aa.
Product: Conserved hypothetical protein

>YALI0B19184g_CDS-001 MLTLQQVVTWLKGVELYSKGDYAPALKQFNQLINSPEYSGEVSKVAHNIAAIYYKMEDHE
RATKWFVTALQKDPYLCITHFLFGQCLFEQEKYSEAAKEWDKCLEYMRGNTWINYQPLGL
NFTLYSCEVMFNKSMAKIYSGDILPGVSDLSRAGKEHKWSADHNRIDKAYIYFNAIKDSL
HRATHTTKQSQNDGLQRSKSLSRSKSQNLSRSKSLARSKSMKHKQQQLQDNIRNRSSMGF
GANYTNTFDVSQAEKEAAKQLAQQSSGNVGPVGLGIRQSPSMRGSPANRPSPNFNNNGGT
PNLGRSQTLGGGGHTQSSQLHRSQTTGHAHSVAEHPHSSANVHRSQSTRAPVTGTSTTEV
DLPSTVKMARMNETYKIYQISSEFCLFSIHDNRLKNIVGCEQMASLLRGKDKEISSGGGV
VGASSPPPEDSTEFSFVESVGRSDDVDDIYDIDDYYGTPPASTGQRSANQSVNRSGGSIK
SNAATVATGSPPARSKPTPIDVDLAREMRKVSFDSSLSTPKLNKLVDKIQGTTRDSVSST
DSIHAPKATKHRVQINYIRPVTAKVCSFVAEECSSPDTPITPIPVKKKAVKDYSTRSPYP
DSVASSSYEDETTSWSKSLPLLPNDHAAHKTDQRLRELRERDRREIRDGFIDRDTGMTPP
QSHQFDPTNTVAPGRSRNTKFLTVDLDDPNHQGNNGRSKSPGSPMSPFILVT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG