YALI0B18898g

Overview

Description similar to uniprot|Q9Y7B6 Emericella nidulans 3- methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase)
Locus type CDS
Locus tag YALI0B18898g

Location

Species Yarrowia lipolytica Positions 2484233..2485280
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1048 (nuc.)
Previous locus YALI0B18876g Next locus YALI0B18920g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18898g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18898gYALI0B18898g_mRNA-001YALI0B18898g_CDS-001

Nucleotide sequence

 

>YALI0B18898g
ATGTCTCTTTTGCGCACTCTGAGGCCCGTTCTGGGCTCGGCCCGGCCTGTCACACCAGTT
TTGGCCCGGTCCTACTCGGCCCATCACTCTCCTCAGACATCAGATCAAACTCGAAAAAAG
GTCACTATTCCCGAGTTGGCCAAGATGCGACGAAACAAGGAGAAGATCAGCATGGTAACG
GCCCATGATTACGTGACCGGTCTGATCGCTGACAAAGCCGGTGTTGATATGATTCTGGTC
GGAGACTCCTTGGCCATGGTGGCTCTGGGGTACCCCAACACCAACCAAATCGAGCTCGAG
GAAATGGTGTATCATGCTAAGGCTGTTTCTCGAGGTGTTAAGAGCGCGTTTATGGTTGCA
GACCTGCCTTTTGGTTCGTATGAAGAGTCCCCAGAGAAAGCTATCCGATCTGCTATTCAG
ATGATCCAAAAGGGAGGAATGGAGGCTGTCAAGATGGAAGGAGGCAAGGAACTGGCGCCC
ACTATCAAGCGACTGACCGAGGTGGGAATCCCTGTTCTGGGACATATCGGACTCACCCCC
CAGCGTCAGTCGTCGTTGGGAGGATTCAGAGTGCAGGGTAAGACTGCCTCTGGAGCAGAG
AGTATTCTGGAAGACGCGTATGAACTGCAGAAGGCTGGATGTTTTGCTATTGTGCTTGAA
GCAGTTCCCGACAAGGTTGGAGAATGGCTCAGTTCGAAGCTAGAGGTCCCTACCATCGGT
ATTGGTGCTGGACCCGGAACCTCCGGGCAGGTGCTGGTCATGCTCGATATGCTGGGAGGA
TTTGGAAGCTTCACGCCCAAGTTTCTCAAAAAGTACTCGCAGTTTCTTGATATTAATGTT
GGAGCTGTCAAGCAGTACCATGAGGAGGTCAAGGGTGGAGTGTTCCCTGCCCAGGAGCAT
TGTTATAAGATGGGTGATGAGGAAGCGGCTAAACTGAAATAACGAGCGAGCCGATTATAT
GATAGGTGAGTGAGTGGTTGTCCACGGTCAGCTGCTCACTGCCCCCCAGGATGATGTATA
TATATTAATGACGATACGATAGTTTAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18898g_CDS-001

Protein length: 314 aa.
Product: 3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase), putative

>YALI0B18898g_CDS-001 MSLLRTLRPVLGSARPVTPVLARSYSAHHSPQTSDQTRKKVTIPELAKMRRNKEKISMVT
AHDYVTGLIADKAGVDMILVGDSLAMVALGYPNTNQIELEEMVYHAKAVSRGVKSAFMVA
DLPFGSYEESPEKAIRSAIQMIQKGGMEAVKMEGGKELAPTIKRLTEVGIPVLGHIGLTP
QRQSSLGGFRVQGKTASGAESILEDAYELQKAGCFAIVLEAVPDKVGEWLSSKLEVPTIG
IGAGPGTSGQVLVMLDMLGGFGSFTPKFLKKYSQFLDINVGAVKQYHEEVKGGVFPAQEH
CYKMGDEEAAKLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG