YALI0B18700g

Overview

Description similar to uniprot|Q8TG13 Neurospora crassa CKA Casein kinase II alpha subunit
Locus type CDS
Locus tag YALI0B18700g

Location

Species Yarrowia lipolytica Positions 2450739..2451856
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1118 (nuc.)
Previous locus YALI0B18678g Next locus YALI0B18722g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18700g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18700gYALI0B18700g_mRNA-001YALI0B18700g_CDS-001

Nucleotide sequence

 

>YALI0B18700g
ATGAGCATGGAACCGCGATCGAAAAACCCGTACTCGGTTGCGCGGGTATTTGCGGACGTC
AACGCCAAAATGCCCCAGCAGTACTGGGACTACGATAACCTCACGATAACCTGGGGCAAC
ATTGACAACTACGAAATCTACCGCAAAATCGGCCGGGGCAAGTACTCGGAGGCATTTCAG
GGCGTTTGTGTGGTCAACAAGCAGCAGTGTGTCATCAAGGTGTTGAAGCCCGTGAAAAAG
AAGAAGATTAAGCGAGAAATCAAGATTCTACAGAACGTGGCGGCTGGCCCTAACATTGTG
TCTCTTCTGGACGTGGTGCGTGATCCAGTCAACAAAACTCCCTCTCTCATCTTTGAGTAC
GTGGAGAATGTCGACTTCCGACAGGTGTTCCCCAAGTTCAAGGACTACGACATCCGATAC
TACATCTACCAGGTGCTGGTGGCCCTGGAGTACTCCCACTCCAAGGGAATCATGCACAGA
GACGTTAAGCCCCATAACATCATGTACGACCCTCGACGGGGCAAGGTGCGACTCATCGAC
TGGGGTCTGGCCGAGTTCTATCACTCGGGCACCTATTATAACGTCCGAGTGGCGTCTCGA
TGCTACAAGGGCCCCGAGCTGCTATACGACCTGCAACAGTACGACTATTCGCTGGATCTG
TGGTCGCTGGGCTGCACTCTGGCCGGCATCATCTTCCGAAAGGACCCCTTTTTCCACGGC
TCGTCCAACCAGAACCAGCTGGTGGAGATTGCCAAGGTGCTGGGTACGTCGGACATGTAC
AAGTGTCTGACCAAGTACGGCCTCAAGCTGCCCGACATTTACAACGACATTCTCGGCACA
TACCCCCGACAGCCGTGGGAGAAGTTTGTCACCAGTGCCACCCAGGCCATCGCTAACCCC
ACTGCCATTGACTTTCTGGACAAGATTCTGAGATACGACCATCAGGAGAGACTGACGGCC
CGGGAGGCCATGGACCACGAGTACTTTGACCCGGTCAGGGACGACTTGCGAAGTATTAAT
GCTCAGTAGAGAGGGTAATGGGGAGGAGATCGGACGTGTACACAACACCCAAGTTTAACT
GCATTGTATTCTAATGGCATGTATGATATGAGTAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18700g_CDS-001

Protein length: 343 aa.
Product: Casein kinase II alpha subunit, putative

>YALI0B18700g_CDS-001 MSMEPRSKNPYSVARVFADVNAKMPQQYWDYDNLTITWGNIDNYEIYRKIGRGKYSEAFQ
GVCVVNKQQCVIKVLKPVKKKKIKREIKILQNVAAGPNIVSLLDVVRDPVNKTPSLIFEY
VENVDFRQVFPKFKDYDIRYYIYQVLVALEYSHSKGIMHRDVKPHNIMYDPRRGKVRLID
WGLAEFYHSGTYYNVRVASRCYKGPELLYDLQQYDYSLDLWSLGCTLAGIIFRKDPFFHG
SSNQNQLVEIAKVLGTSDMYKCLTKYGLKLPDIYNDILGTYPRQPWEKFVTSATQAIANP
TAIDFLDKILRYDHQERLTAREAMDHEYFDPVRDDLRSINAQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG