YALI0B18557g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B18557g

Location

Species Yarrowia lipolytica Positions 2434395..2435826
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1432 (nuc.)
Previous locus YALI0B18546g Next locus YALI0B18568g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18557g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18557gYALI0B18557g_mRNA-001YALI0B18557g_CDS-001

Nucleotide sequence

 

>YALI0B18557g
ATGCTGTCATTCCCTTTCGAAACCCCATCGCAGCCAACTCTGGACCACTACGCCGAGCGT
CTGCACACAAAGACAAACTCGCTGGACCCTCTCGATGTCGCCTCGCCTCCCTTTTGCGAG
TCGCCGGGCCAGTCCATGCTGGAGCAGGCCGTCCATGTGATTTCAGCCAACGTTGTGGAT
CTTGGATTGCAGACCAGAGAACAGACAGTGAAGATTCTGTCGGTTCGATCTTCTATCGGC
GACGCCTACCAGCTCGCAATCCCCGAGATCCTGGACACCTACAAGTCGCTGCAAGAAAAC
ACAGACATTAGCATCCACGTGACCCACGTGGTTCCTCCTCACAAGTCCATAATCCCTCCT
TCTTACGGACAAGCCACCCCAAGCTCCTCCTGGGTTCCCACTGCAAATGGAGCAGCAGAG
CCTGCATACCCCGCCTTTGCTGGAGCTGATGTCGTGGACGCTCAGAAGGTTGCGTCTCCT
TCTCTGACTCCTCGCCTCTCCTACTTTGGCCACCAGTTTGACCCCATGAGCCCCGATCTC
GCAGACGAAGACGACCTTATGGGCCACCGAAAAATTAGAGCCTCTCTCAACTACATTCAT
GCTAGCTCCCCCAACGAGTCACAGCTTTCGCGATCCACTTCGCTGTCTTCTAGACAGTCG
GTAGACTACCTGAGCGCCCCCACAGTGCAGCTTCTGCCCCATACCACCCCTCCTCGAGAC
GTGTTTGAATCGTACTCGTTCATGAACACCTCTACCAGCATGGTTTCTCCCCCCGCATCC
ATCCACTACACCTTTGCTGTTCTTCCTCTTCCCACACACGTTCTGCCTCCCTTTCAGGAG
TTTGTCAACTCGAGAATGCGAGAGCTCGTGCCTGGAGGATGCATGGTGCTTCTGTACCCC
TCCAACCTGTCTTTCTTCACCAAGACAATCTCGCCCAATCTCGACCGAGCCCTGCGACAG
ATGCTGGCGCTCTCCATGATCAACACAAACACTTGTGAGCTCATCTCGCAGCTGCCTCCC
ACTCCCCCCACTTTTGAGGAGCAGCTCTCGTTCCTAAATTCGGTGGGAGACATAGAGGTG
TTGTTTTCCAGCGCACGCAAGAACGTGGAGATTGAGGACTGGGGTAAGAAGTGGACCTCA
GAAGAGTACAAGTGGTACGCAGCTATCATGGCCCAGGAAGGCCACCGTAACAACACTCTG
ATGGACATGCTGCAGGGACTAGAAAAGAGAGGCGAGGTGGCCACCTCAGACGTGTCCATG
TTTGTTCTTCGACGGTGTTAAAACTCACACAATCAAACATCAACTACAAACTACAAACTA
CAATCGACGATCGACAAACGACAAAACGATCAAAATCAGACAAAAAAATAGCCAGCAGGC
TGGTTGCATTATATAGGTTGCATTGGGTAATATTTATGTGTATATGTTAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18557g_CDS-001

Protein length: 427 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B18557g_CDS-001 MLSFPFETPSQPTLDHYAERLHTKTNSLDPLDVASPPFCESPGQSMLEQAVHVISANVVD
LGLQTREQTVKILSVRSSIGDAYQLAIPEILDTYKSLQENTDISIHVTHVVPPHKSIIPP
SYGQATPSSSWVPTANGAAEPAYPAFAGADVVDAQKVASPSLTPRLSYFGHQFDPMSPDL
ADEDDLMGHRKIRASLNYIHASSPNESQLSRSTSLSSRQSVDYLSAPTVQLLPHTTPPRD
VFESYSFMNTSTSMVSPPASIHYTFAVLPLPTHVLPPFQEFVNSRMRELVPGGCMVLLYP
SNLSFFTKTISPNLDRALRQMLALSMINTNTCELISQLPPTPPTFEEQLSFLNSVGDIEV
LFSSARKNVEIEDWGKKWTSEEYKWYAAIMAQEGHRNNTLMDMLQGLEKRGEVATSDVSM
FVLRRC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG