YALI0B03300g

Overview

Description weakly similar to uniprot|Q06436 Saccharomyces cerevisiae YLR427w weak similarity to human transcription regulator Staf-5
Locus type CDS
Locus tag YALI0B03300g

Location

Species Yarrowia lipolytica Positions 474557..475867
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1311 (nuc.)
Previous locus YALI0B03278g Next locus YALI0B03322g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B03300g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B03300gYALI0B03300g_mRNA-001YALI0B03300g_CDS-001

Nucleotide sequence

 

>YALI0B03300g
ATGAAGAGATACATTTTAGACCCCTCAGGCGACTACAGAGGCATCACCGATGATCCGGAA
GCCGTTCCAACGACAAAGCAGGTGCTCTTGATGCGTCTACACCCATCTCAGAAATCGCCA
TGTCCGATTTGCCTACACCCAGAGCCAGTGGGACCCTACATGCTGGAATGTGGGCATGTT
TTCTGCATTTCCTGTTTGTGTCGACTATCGCAGCAGAGCGAGAGTCGTTCACAGCACAAA
ATCTCGTCTCAGAACGAAGTGACGTGTCCTTCATGTGTCTACAAAGACTACGACGTTTCC
CGGGGAAAGTTCGTTCTATGGGACGAACAGCGACCGAGCGGAACTGACAAAGGCCACTTG
GAAATGCAAATGAAGGTGCGAATATCTGGAAACTGTGCTGTTGTTCGAGATTGTAGCTGT
GAGGCGTCGTCGAGCTCGGATACCATCCCGTACCATACACAAAAGGGCTTCGAGAGTTCG
AGGTACTTGTTAGGAGATAGAGATGCTTTAATTGGCTACTATAGCTCGTTGAAGCATGCG
ATTGAGCAAGAGACCATTCTTGACCACAACGATGAGACGTTCTCAGGAGAGCATGTGTCT
CAAGTGGTTAAGTTGGTGGAGAACAAGATCAAGGAAAGCGAAGCATTAGGAGGAGGAGAA
TCGATAGAAGAGGACCTGGACAAGGAAAAGGATCCTGGGGATGATGTATTTGCACATACA
CCCAAGGGCGACTTCTACGTGTCCCCGAAAAAGAGATCTGCATTGAAGGCCCAGTTTCCT
ACTGTGTCTCATATTCCGAACCACATGAAACGACCAGTTCGTTTGCGACACTACTACCAA
GGGACGGCAGGGGAGGATGTCTACTTGTCGAAACTCGATTCGAAAATCATGCAGACTGCC
TTTGGGAGTCTCGACAAGAGTCCAGCACTGATCAATGTTCCTGTGGAGGCAGTTACTCAG
GCGAAGGTGACGAGGGAGATGAAAAGAGACGCGGAATATGAGCATTTGTCGACAGACTCG
ACGATTTCACTGGTAGAGATTGACTGGGAAAAGACGGACATTGTTACACCGGAGGTTCTG
GTTGCTTTCACAGACGCCATTTCTCGGAGACGCGAAGCGCGTGAAAAGGTCAAGCGGGCT
GAACGAGCTGCTCAGAAGAAGATCCAGAAAAGCATGCGCTATGAAGAAGACTATTACTAT
GATGACGATGACTACGATGACGGATATGAGGATGAGTATCAGACGAACGGAGGCTTGCCC
CCTCTGGACCTGTTTGATTGCGTCACCAAGGTGGTTGATAAGAGGTGGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B03300g_CDS-001

Protein length: 437 aa.
Product: Conserved hypothetical protein

>YALI0B03300g_CDS-001 MKRYILDPSGDYRGITDDPEAVPTTKQVLLMRLHPSQKSPCPICLHPEPVGPYMLECGHV
FCISCLCRLSQQSESRSQHKISSQNEVTCPSCVYKDYDVSRGKFVLWDEQRPSGTDKGHL
EMQMKVRISGNCAVVRDCSCEASSSSDTIPYHTQKGFESSRYLLGDRDALIGYYSSLKHA
IEQETILDHNDETFSGEHVSQVVKLVENKIKESEALGGGESIEEDLDKEKDPGDDVFAHT
PKGDFYVSPKKRSALKAQFPTVSHIPNHMKRPVRLRHYYQGTAGEDVYLSKLDSKIMQTA
FGSLDKSPALINVPVEAVTQAKVTREMKRDAEYEHLSTDSTISLVEIDWEKTDIVTPEVL
VAFTDAISRRREAREKVKRAERAAQKKIQKSMRYEEDYYYDDDDYDDGYEDEYQTNGGLP
PLDLFDCVTKVVDKRW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG