YALI0B03102g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B03102g

Location

Species Yarrowia lipolytica Positions 452281..453464
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1184 (nuc.)
Previous locus YALI0B03080g Next locus YALI0B03124g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B03102g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B03102gYALI0B03102g_mRNA-001YALI0B03102g_CDS-001

Nucleotide sequence

 

>YALI0B03102g
ATGCTACAAATCCGCAGATACTCGACATTCAACTCGGCCAAGTCTATGGCCGCGTCTGTG
GCCAAACTCTTCGACAGACGACCGGAACTGAGCCCGGAAGAGACATCTCAGATCCTGGTG
GAATCCATGGAAGGCACATTCGATAACTACATGAAGGGCAGAGAGAAGCACCTTAAACTG
GACTCGTCATTCGGAGAGGCACCCAACGGTCTCAAACACCCTCAGCATGTGTCCTCCATG
TCGCACTCTGATGTCGCGCAGCTGCTTCGATCTGCTACTTCTGAAACCCAAGTGTTTGTG
ACTCTTGAAGAGATCCCCAAGCTCAGTCTCAAGGTAATCAACGCGGCCCTCAGCAACCCC
GCAGTGCACAGAATCGAGCCCATTGGAGCGCTGGTCAAGAACTACGGCCCAGCTCGTCAC
AACGTTGTGGGAGTGGGCTACGACGTGTTGTCGTGGAAGTGGCTGCTGGACCACGGCAAA
CACGAACAGGCACAGAACCTCGTCGAATCCAAGGTCTCGCTTTCGTGGATTCCGTCGCTC
ATGCAGCTGCCCCGGTACTACCCTGCCGTGGCCAACCTGTGGGCCAAGGCCGTCATCACG
TGTCTCACTCCCGACGAAATTCACTCTATAGTCGCCGACAAGCTCGCATCGCCCATGGCA
ACGTCACATGAGCGAGGTGTTCAACTAGCTGTGACTCTATGGATCCAGGCCGTCAAGGAC
AAGAACCCCATCTCTGAGCAGATCATCGACTCTTTTCTGTTCACTTCCGGAGGCGCCGAC
AAGCGAGCTCTGCCGCAATCCACTCTCGCCATGTTCTTCCAGATGCAGCAAGACTTTGAC
ATTAAACACACCACTGCCGCAGTCAAGATTTTCATGGGCGAGGGCGCCAAGCGACAGTTC
TGCCTGGAGTCGTTCTTTGAGTACGCTATTGAAATGCGAGATCAACATCCCGAGCGAGCA
TCTGCGATCAACACTATTCTCCAGAGGCAGCTAGTGGATCCTCACCCCGACCTAGTTCTT
TCCAAGCTCTCCAGCAACAACATTCTGCAATCATTTCGGAGCAAAGACTTGAAGAAGAAC
GGCAAGAAAGACCGATTTACATCTCGGAACCTCCTGAACCATGTCTAGAGGCTTGAACTT
GTACATAGATAGCATAGCATTAACATATTTATTGGGTACTCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B03102g_CDS-001

Protein length: 376 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B03102g_CDS-001 MLQIRRYSTFNSAKSMAASVAKLFDRRPELSPEETSQILVESMEGTFDNYMKGREKHLKL
DSSFGEAPNGLKHPQHVSSMSHSDVAQLLRSATSETQVFVTLEEIPKLSLKVINAALSNP
AVHRIEPIGALVKNYGPARHNVVGVGYDVLSWKWLLDHGKHEQAQNLVESKVSLSWIPSL
MQLPRYYPAVANLWAKAVITCLTPDEIHSIVADKLASPMATSHERGVQLAVTLWIQAVKD
KNPISEQIIDSFLFTSGGADKRALPQSTLAMFFQMQQDFDIKHTTAAVKIFMGEGAKRQF
CLESFFEYAIEMRDQHPERASAINTILQRQLVDPHPDLVLSKLSSNNILQSFRSKDLKKN
GKKDRFTSRNLLNHV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG