YALI0B02420g

Overview

Description weakly similar to uniprot|P36156 Saccharomyces cerevisiae YKR076w ECM4 involved in cell wall biogenesis and architecture
Locus type CDS
Locus tag YALI0B02420g

Location

Species Yarrowia lipolytica Positions 377163..378096
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 934 (nuc.)
Previous locus YALI0B02409g Next locus YALI0B02431r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02420g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02420gYALI0B02420g_mRNA-001YALI0B02420g_CDS-001

Nucleotide sequence

 

>YALI0B02420g
ATGTCTCTTCTTCCACCTCCCCATACTTCTGATACCATGAAACAAATAACCAGACAAACT
AAAAACTTGCACCTATATGTTTCTCGAGGATGCCCGTTCGCCCACCGAGCTTTGATTATG
CGCGATCTGCACAAGCTGGACAATATCAGTGTCGATGTTGTGGACCCAGTCTTGGGAGAC
AAGGGGTGGGTGTTCTCGCCCTCGAAGGAAGGGTGTACTAAAGACACAATCTATGGGCTC
GACACGCTCCGTCAAGTGTACGAAAAGGTCGACCCTGGCTACTCAGGATCCATTACCGTC
CCTCTATTGATTGACACTCACTCGAACAAGTTGGTCAGCAATGAGTCAGCCCAGATTGCC
GAGATGATGGACGGCGAGTTTGACAAACGGGTCAAGAAGAGTACCGACTTTGTCCACAAA
AACATCACTCTTGCCGTGTACAAGGTGGGCTTCTCTAAGGACCAGACCGCTTACAATGGA
GCGATCAAGGAGCTGTTCTCGGCTTTGAAAAAAGTCGAGAAGGATCTGAGAGACAGCAAG
TATCTCGCTGGAGACAGTCTGACAGCAGCCGATGTGTTTCTGTACACTTCGATTGTCAGA
TTCGATCCGGTCTATGTGCAACGGTTCAAGTGCAACGTTGGCATGATCCGCCATAACTTC
CCCTGGATCCATCTTTGGCTGAGACACCTGTACTGGCAGGTTCCAGCATTCCGAGACACA
ACTGATTTTTCGCACATTAAACAGTTGTATTACGACAAGGGTCCAGAAAGCATTATCCCT
GCTGGTCCGGTCCCAGATATCGAGAAACTCGAAGAGTGACATTGCGTGAGGGCAGCACCC
CTATGTACGAGTACATACAGTACTGTACAGTACAGTGTACGACAAGTATTTACCTTATGA
AAGACCCGCCCGTAATACTGCGTGAAAATCGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02420g_CDS-001

Protein length: 273 aa.
Product: Conserved hypothetical protein

>YALI0B02420g_CDS-001 MSLLPPPHTSDTMKQITRQTKNLHLYVSRGCPFAHRALIMRDLHKLDNISVDVVDPVLGD
KGWVFSPSKEGCTKDTIYGLDTLRQVYEKVDPGYSGSITVPLLIDTHSNKLVSNESAQIA
EMMDGEFDKRVKKSTDFVHKNITLAVYKVGFSKDQTAYNGAIKELFSALKKVEKDLRDSK
YLAGDSLTAADVFLYTSIVRFDPVYVQRFKCNVGMIRHNFPWIHLWLRHLYWQVPAFRDT
TDFSHIKQLYYDKGPESIIPAGPVPDIEKLEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG