YALI0B02398g

Overview

Description similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 Oligopeptide transporter
Locus type CDS
Locus tag YALI0B02398g

Location

Species Yarrowia lipolytica Positions 369807..372506
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2700 (nuc.)
Previous locus YALI0B02376g Next locus YALI0B02409g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02398g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02398gYALI0B02398g_mRNA-001YALI0B02398g_CDS-001

Nucleotide sequence

 

>YALI0B02398g
ATGAGCTCAGAATCGATCCAGGAGCACGAAAAGTCGGACGACAAGTTCCGCTCGGAGAAG
GAGATCCACGAGATCGAGTTCGAGGCGACCGAAGTCTCGGACGGCTCTTTCATTGACTAC
GTCGGTGAAAAGCTCAACTTCGTGCCCGATGAAAACGGCATCCACACCAAGAACATCCGC
CTGATGGCCAACTTTGTGGCAGAGCTGTCAGACTCCGAAGCTGAAGAGATCCTGCTCAAG
TTCATCCCCGTTCACGAGGATGACTACAACCTTCGTCTGGAATACAAGGAGTACCTAAAA
GCCCTTGTTTCGGGAGAGAAAGACGCTCCCAATCCAGATACGTACTCTTTGGACCTCCGA
ATCGAAGCTGCTGCCATCAAATACTGGTCTCCTTACATTGAGGTCAGAGCCGTCACTGAT
TGCTACGACGACATGGATGAGCCCTGCGAGACCATCAGAGCGTATGCTATTGGTCTGGTA
TGGCTCCTGGTCGGCTGCTTTGTCAATCAGTTCTTCATCTTCCGGTACCCTTCGATCTCC
ATCGGCTCTGACGTTCTCCAGCTGCTCACCTATCCCTGTGGAGAGCTCCTTGCCCGTATT
CTTCCTGACTGGGGCTTCACCTGGAGAGGTACTCGAATCTCCCTGAACCCTGGACCTTGG
AGCCGAAAGGAACAAATGTTCGCCACCTTCTTCTTGTCGGGAGGAGATGGAGCCACCTAC
GTGTCTGCCTACAACCTGCCCACCCAGTTGCTACCCATGTACTACAACCAAAAGTGGGCC
ACCTTTGGCTACCAAATCATGCTGACTCTGTCATCGCAGTATATTGGATTTGGATTTGCA
GGAATCCTCAGACGGTTCGCTATCTACCCTACCAAGGCCATGTGGCCCCTGAACATGCCC
ACCATCGCCCTCAATCGTGCACTTCTAGATCCCGAAAGAAAGCAGAAGATCAACGGATGG
ACCATCTCCAAGTATTGGTGGTTTCTTGCCACTTTTGTGGTCTCCTTTATCTACTACTGG
ATCCCTGATTACCTCTTCCAGGCGATCTCCAATTTCAACTGGATGACTTGGATTGCACCC
AACAACGTCAACCTGGCACTCATCACCGGTCAATCTGGAATGGGCATCAATCCTATTCCT
ACATTTGATCTCAACCAGATCGGAGTTGGCAGTGTCGTGACTCCCTGGTGGTCTATTGTC
AACAGTCTGATCGGTCTTGTTATCGGTACTTTTGCCGTCATCGGTGTCTACTACTCCAAC
GTCCGATGGACTGCCTACCTGCCCATGAACATGCCTGGTATCTACAACAACAAAGGAGGC
AGCTACAAGGTGACAAAGATTCTTACCAACGGAGTTTTTGACTTGGAAAAGTACCACGAA
TACGGACCTCCGCTGTGGAGTGCAGGAAACCTCGTGGCCTACGGAGCCTTCTTCTCCGTC
TACACCCTTGGCTTTGTCTATACAATGTTGGCTTACTGGCAAGACATGAAACAGGCGTCT
ATCGACTTCTACAACGGAATTGCCTTCTGGAATGGAACTAAACGTACTGAGGTCGACTCA
CCTTTTGCCAAGCAGCTCAAAAAGTACGCCGATGTGCCTGATTGGTGGTTCTTCCTCATT
CTGCTCATCTCCATCGGATTCTGTATCGGAACAGTCAAGGGATGGGAAACCACCACTCCT
GTCTGGGGTATTTTCTTTGTCCTTGGTATCAACCTCGTCTTCCTGATCCCCATCTGTCTT
CTGCAGGCATACACAGGGAACGGATTTGCTCTCAACGTGCTGGTCGAAATCATCTGTGGA
TACGCTCTCAACGGTCGTCCCACGGCCCTAAACATTCTCAAGGCTTACGGAGTCAACGTT
GACTCTACGTCTCAGGGATTCGTATCTGTATGGAAGACCGGTATGTATACTTATGTTCCC
TCTCGAGCTATTTTTCGATCCCAGGTCTTGTCAACTCTGATCAGTGCCTTTGTCACCGTC
GGTATTCTCCAGTATCAGCTTACTCTCCAGGATATTTGCACTCCTGCCCAGAGAGCTACC
ACCAAGTTCACCTGTCCTGGTCAGAACACCTTCTACGCCGCCTCCGTGCTTTTTGGAGCC
ATTGGAACCAAGCGTTTCTTTGGTACTGGAGGAAACACGGGCCTATACCCCTTCCTCAAG
TGGTGTTTCCTCCTTGGAGCTGTTGTGGGTCTTGTCTTCTTTGTTGTCCAGTACACCATT
CCTCACTACATTGGAAAACGGTTCCCAGAGCGAAAACAAGCCATGATCCGACTTTCAGAG
CGTCTTGGAAAGTACAACCCCGTGGTCATCAACATGGGTCTCATTGGATTTGCTCCTGGA
AACCTCTCATATTCCATTGGAGGCGTCTACCTTGCAGCCGCTTGGACTTTGTACATCAAG
AAGCCGGTTCCCTGAATGGTGGGCCAAGTATACCTACGTTGGGGTTGCTGGAATTAACGT
GGGAATTGCTCTTTCCGGTATCATTGTGTTCTTTGCTCTCCAATACTCAGGAGTGTCGCT
TGACTGGTGGGGCAACAATGTTCCGTGGGAAGGAGCAGACGGAAACCTGACGCCTTTGTT
GGAAATTCCGGATGGTCAAATTATTGGTCCTCCTAAGGGCAGTTTCCCTTAAGCAGGAGC
TTGTCACGTTCATTTTGAGATTCAATGAGAGTAATTTAGTAATAAATGTCAATTGGACAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02398g_CDS-001

Protein length: 805 aa.
Product: Oligopeptide transporter, putative

>YALI0B02398g_CDS-001 MSSESIQEHEKSDDKFRSEKEIHEIEFEATEVSDGSFIDYVGEKLNFVPDENGIHTKNIR
LMANFVAELSDSEAEEILLKFIPVHEDDYNLRLEYKEYLKALVSGEKDAPNPDTYSLDLR
IEAAAIKYWSPYIEVRAVTDCYDDMDEPCETIRAYAIGLVWLLVGCFVNQFFIFRYPSIS
IGSDVLQLLTYPCGELLARILPDWGFTWRGTRISLNPGPWSRKEQMFATFFLSGGDGATY
VSAYNLPTQLLPMYYNQKWATFGYQIMLTLSSQYIGFGFAGILRRFAIYPTKAMWPLNMP
TIALNRALLDPERKQKINGWTISKYWWFLATFVVSFIYYWIPDYLFQAISNFNWMTWIAP
NNVNLALITGQSGMGINPIPTFDLNQIGVGSVVTPWWSIVNSLIGLVIGTFAVIGVYYSN
VRWTAYLPMNMPGIYNNKGGSYKVTKILTNGVFDLEKYHEYGPPLWSAGNLVAYGAFFSV
YTLGFVYTMLAYWQDMKQASIDFYNGIAFWNGTKRTEVDSPFAKQLKKYADVPDWWFFLI
LLISIGFCIGTVKGWETTTPVWGIFFVLGINLVFLIPICLLQAYTGNGFALNVLVEIICG
YALNGRPTALNILKAYGVNVDSTSQGFVSVWKTGMYTYVPSRAIFRSQVLSTLISAFVTV
GILQYQLTLQDICTPAQRATTKFTCPGQNTFYAASVLFGAIGTKRFFGTGGNTGLYPFLK
WCFLLGAVVGLVFFVVQYTIPHYIGKRFPERKQAMIRLSERLGKYNPVVINMGLIGFAPG
NLSYSIGGVYLAAAWTLYIKKPVP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG