YALI0B01672g

Overview

Description similar to uniprot|P26725 Saccharomyces cerevisiae YJL139C (ohnolog of YKR061W) YUR1 mannosyltransferase
Locus type CDS
Locus tag YALI0B01672g

Location

Species Yarrowia lipolytica Positions 258697..260233
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1537 (nuc.)
Previous locus YALI0B01650g Next locus YALI0B01694g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01672g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01672gYALI0B01672g_mRNA-001YALI0B01672g_CDS-001

Nucleotide sequence

 

>YALI0B01672g
ATGGTGGAAAAGAACCCGGCATCACCGAAACGGACCTCCAAGAAATCGGTACCGTCGCCG
CGCTCGCTGCTTTTCCCCATCCTACTCCTAGCGGGCATCCTCATCTTGCTACTTAGCCAA
ACGGTGGGCGTCCTCTCGATAGTGGAATCTCTCGCGTCTCTCAAACCCGCAGCCACAAAC
CCATATCCGTATGAAAACCGCAAATGGATTTACGACTTCACCCATCAGCCGTGGTCCGGG
GCCGACACCAAAGACCGGCGGCAAATTGGGCGAGAAAACGCCACTCTGGTCATGCTGGTG
CGAAACCGAGAGCTCAAAGAAGCTGTGCTGGCCATGCGATCGATCGAGGACCGGTTCAAC
AAGAAATACAAGTACCCCTGGGTGTTTATGAACGACCGAGAGTTCACCGAAGATTTCAAG
GAGTACACCACCGGCATGGCATCGGGCCACACCGAGTACTACAAGGTGCCCAAAGAGGCA
TGGCAAATGACTCCAGGAATCGACCGAGACCTAGTGTTTGAGTCCGTGGAAAACTTCACC
AAGGAAGGCGTCATCTACGGAGACTCCTTGTCCTACAGACGTATGTGCCGGTTCAATTCA
GGGTACTTTTTCCGAATGGCTCCTCTGCTCAAGTACAAGTACTACTGGCGGGTGGAGCCA
GACGTGGAGCTCTATTGTGACCAGCAGTACGACCCCTTCACCTTCATGCGCGAAAACAAC
AAGCTCTATGGCTTTGTCATGGCCATGTACGAGTATCCTCAGACTGTGGCTACGCTGGCA
GAACATGTCCAGGGCTTCTTTGACGTTCATCCGCAATACGTGCATCCCAATTCGTCGGTA
GGGTTTCTCAAGGACAAACGGGTGAACCGGTTTGGCGATCTCATGCCCGAGTGGCACGGC
GAGTGGAATCTGTGTCATTTCTGGTCCAATTTTGAGATTGGCAATATGGATTTTTTCCGG
TCGAAAAAGTATCTCGAGTTCTTCGAGTGGCTGGACCGAGCCGGTGGGTTCTTCTATGAA
CGCTGGGGAGACGCGCCCGTCCATTCTTTGGCGGTGGGTTACATGATGGACAAAACTCAG
GTTCATCAGTTTGCAGATATCGGATATTATCATCCTCCGTTTTTCAGATGTCCTGCAGAT
GAGCAGAGTCACAAGTCGGGACGATGTGCGTGTCCTGAGGATCTGAATGGGTACAAGAAC
TTTGATTATGAACCCATGAGTTGTCTGCCGAGATGGTGGGGCAATGCGGGCAAGGCGTGG
ATGAAGGATGGGGTGCATATTAACGTGTGACGAGAGATCGGTGATGGAAACCAATATCCC
GAATCGTTCATTAAACGCTCAGTCTCGCGTTGAGTGGACATGAACTCTGGTTCCAACTGC
CAGACCGGGGTTCTCTGAAACTATGGACAGCGAGGCTGTGAATGGTCTGACATGTGTCTG
GACAAGGCCTCAGTCTTCTATTATGGAAGCTACATTGTTTTTCTAGCCCTGGGTGTCCAT
AGATGGTTGCAAATAGCATAAAAGTACATAGATACGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01672g_CDS-001

Protein length: 430 aa.
Product: Mannosyltransferase involved in protein N- glycosylation, putative

>YALI0B01672g_CDS-001 MVEKNPASPKRTSKKSVPSPRSLLFPILLLAGILILLLSQTVGVLSIVESLASLKPAATN
PYPYENRKWIYDFTHQPWSGADTKDRRQIGRENATLVMLVRNRELKEAVLAMRSIEDRFN
KKYKYPWVFMNDREFTEDFKEYTTGMASGHTEYYKVPKEAWQMTPGIDRDLVFESVENFT
KEGVIYGDSLSYRRMCRFNSGYFFRMAPLLKYKYYWRVEPDVELYCDQQYDPFTFMRENN
KLYGFVMAMYEYPQTVATLAEHVQGFFDVHPQYVHPNSSVGFLKDKRVNRFGDLMPEWHG
EWNLCHFWSNFEIGNMDFFRSKKYLEFFEWLDRAGGFFYERWGDAPVHSLAVGYMMDKTQ
VHQFADIGYYHPPFFRCPADEQSHKSGRCACPEDLNGYKNFDYEPMSCLPRWWGNAGKAW
MKDGVHINV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG