YALI0B01628g

Overview

Description similar to uniprot|P53258 Saccharomyces cerevisiae YGR100w MIC1 MAC1P interacting protein
Locus type CDS
Locus tag YALI0B01628g

Location

Species Yarrowia lipolytica Positions 251516..254576
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 3061 (nuc.)
Previous locus YALI0B01606g Next locus YALI0B01650g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01628g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01628gYALI0B01628g_mRNA-001YALI0B01628g_CDS-001

Nucleotide sequence

 

>YALI0B01628g
ATGTCGTTTCTCACCTCGCTCAAAAACAAGGCGCTGGAGCTGTTTGAGCCGGAAACCTCG
TCCGGCGTCATCCAGACCGCCGCCGATACAGCGCAATTTTCCGACTACAAACGCCGACTC
AACAAGGACGAAAAGTTCCGGCTTCAATTTAGTCTGCCGGACTCGCAGAAGCTGCTGGCG
GATATCAGCGTCGAGGTTGCGCTTCAGAACGCAGAAAACCCGCCCGTCAACCCGGGCCAG
GCGGCCCGCTCGGAATCTCTCATTGAGTTCTCCAACGTCATCTACCAGGGCAAGCTGTAC
CTGTCGGACTCGTTTTTGTGCTTCACAGCCACCGACGCGCGTCAATGCTCGTTTGCGCTG
CCCCTGCTGACGGTCAAACGGGTCGAGCGACTCCCGCTCAAGTCGTACCTCTTTGCGCTG
TCCATCAAGACATACAACGGCCTGACGCTCGTCATCCAGTTCATCGGCATCAAGTCCGCC
TGCGACCGCTTTTCGCTCGCCCTCAAGGCCCAATTGGGCAAGAACCTTGCCAAGATCAAG
TCTCTCAAGCCCTTCCTCGCCACCCTGTACTCGGAGTACTTGTTGAACGTAATTTCTTCC
GGCCAAAAGGGCGACGCTCCCCCTCCACCACTGGGAGGTCTCGGACAGGTGTTCCGATAC
CCCGGAGACGCCAAAAAGCTGCGGGATAAGTCCAAGATGCGCCTGTGGCTCGAGTACTTC
CAGACGCATGGACGCAACCTGACTTTGGTGAGACAACAGACCTTCTACAAACTCATCCGA
GTGGGTCTGCCCAACCGACTGAGAGGCGAAATTTGGGAACTCACGTCGGGGTCGTTGTAC
CTGCGTCTCGCCCACCAGAGCATGTACAACGACCTGCTTGAGGAGTACGAAGGAAAAACT
TCTCAGGCCACAGAAGAGATTGAAAAGGATCTCAATCGATCTCTGCCGGAGTACTCAGCT
TACCAAGACGAGGAGGGTATCGCCAGACTGAGACGCGTCCTCACAGTGTACTCCTGGAAG
AACCCCGATGTTGGATACTGTCAGGCCATGAACATTGTCATTGCCGCCTTTCTAATCTAC
ATGTCTGAAGAGCAGGCCTTTTGGTGTCTGAATGTCCTCTGCGACAAAATGCTCCCCGGA
TACTACTCAAAGAGCATGTACGGCACGTTGCTTGATCAGAAGGTGTTTGAGTCTCTGGTC
GAGAAGACTATGCCTCTTCTGTGGGACCATCTTCAGCGATGCGACGTGCAACTGTCGGTC
GTCTCTCTGCCGTGGTTCCTTTCAATTTTCATCAATTCCATGCCTCTGGTGTTTGCCTTC
AGAATCATTGATGTATTCTTCCTTGAGGGACCCAAGCTTTTGTTCCAGGTGGCTCTGGCT
ATTCTTCGAATCAACGGAGAGCGGCTTCTTGAAGCTGATGACGATGGACTTATGATTGGA
ATCATCAAGGAATACTTTTTGACACTTGATCAGTCAGCTCACCCAACTTCAAAAAACGAG
AAGCTCAGATCAATCACAAAGTTCCAAGAGTTGATGGTTGTCGCTATGAAGGAGTTCTCT
GTCATCACTGAGCCTCTGATCACCGAGCAGCGGGCCAAGTATCAGGACCGGGTGCTGGAA
GACATTGAAATCTTTGCCAAACGAACTTCCATCCGAAACCTTCACAAGACCAAGAACTTG
TCTCAGGATGATCTGTCAGTCCTCTACGACAGATACCACACTTACCGAGAAATGAATCTG
GAAAACTACCAGAACTTCCTCTCGTCGGTGGTCTGTTGGACAGAACCTCAGGAACTTTCT
ATTGACGGTACACCCGACTTTTTGCGGCGTCTATACACCCGCTGGGACGCCGATATGAAG
GGCACTTTGTCTCTTCAGAATGTTGTCACTGGAATTGACGCTCTGAAGCAGTCCGATCTC
ATGGGTCTGATGACGTACTTCTTTGAGCTGTACGACGACGATGGAGACGGCCAGATCGAT
AGAGAGGGTATTCTGAGCATGTCCGAGGGTTTGCTGTTCCTGACAAAGGCCTGGAGAGAA
GGTACAGTGTACACTGATGGAGCTCCCATTCTTGATCAGATATCGCTTGTGGAACTTGAC
CGAAGAGAGCAGGAACGCCAGGAACTCCTGCAGCAGGAGGAGATTCGTCTGGCCGAGGAG
ATGGAAGCTCTCCGTCTCGAGGCTGAGCAGCAGAAGCTGGCTGAAGAGAACACTTCAGAA
GCTATTTTTGACACTCCTGACACCGATGAGGACGATGCCAAGAGCACCAAGAGTTCCAAG
AGTGCCAAGAGCGTGTCTTCTCGATCGATCAAATCAACTATCGGCTCAATTGGAGCCGCT
GGAGGTGCTGTGAGCGGAGCTGCAATTGGAGCTGTTCGAGGAGCTGTCAGACGAAAGTCG
TTTAAGGATATTGGCGATCCTATGCAGGAACGGCAAAAGGTGGCTCATGAGCAGAACGTG
CGGTATTTGTCTGCCGTTTCTGCCTTCATTCAGCGTGCTTTTGAATATGCCAACGAGGCC
AAAAAGGAGGCCGACAAGGAGGCTGCTGGGGACAAGGGTAAGGATTCTGAGGACTCTGTA
GAGGCTCACAATGCAGCTCTTGACCCTAGCAAACCCCTGTTCATCGATCTGCCCACTTTC
CGAATGGTGGTTCTGGCCGATGAGACGCTCGAGACGCTGTTTGCCGTGTCTCTTCCTCAG
AGTGTCATTCTGCGACAGTCTGATGCCGATAGACACAAGCGAGCGTCTCTGCGAGACGTG
TTTGACGGTTTGGTGGCGGATGGAATGCGCGTTGCAGGCGAGGTGCGAAAGAGAATCGAC
ATTGATAAGAGTGTCAATGACTCGGAGGATATTGGAGAGGTGGTGAGTGGTAAGGATCGG
GATGTGTTGGATGAGGCAATCTAGAGAGATATTGAGGTTGATGGCGTCATGAAATGAGCG
GAGCGAGCCGCGAGACTCAGACAGAGACTTCTCAGTGGACACGTGAGCGGTTAGCGGTCC
ACGACCACTCTCCAAATGTAGAGATGATTAATGTTAATGTTTATGATATGACAAGATGGT
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01628g_CDS-001

Protein length: 968 aa.
Product: Cytoplasmic GTPase-activating protein, putative

>YALI0B01628g_CDS-001 MSFLTSLKNKALELFEPETSSGVIQTAADTAQFSDYKRRLNKDEKFRLQFSLPDSQKLLA
DISVEVALQNAENPPVNPGQAARSESLIEFSNVIYQGKLYLSDSFLCFTATDARQCSFAL
PLLTVKRVERLPLKSYLFALSIKTYNGLTLVIQFIGIKSACDRFSLALKAQLGKNLAKIK
SLKPFLATLYSEYLLNVISSGQKGDAPPPPLGGLGQVFRYPGDAKKLRDKSKMRLWLEYF
QTHGRNLTLVRQQTFYKLIRVGLPNRLRGEIWELTSGSLYLRLAHQSMYNDLLEEYEGKT
SQATEEIEKDLNRSLPEYSAYQDEEGIARLRRVLTVYSWKNPDVGYCQAMNIVIAAFLIY
MSEEQAFWCLNVLCDKMLPGYYSKSMYGTLLDQKVFESLVEKTMPLLWDHLQRCDVQLSV
VSLPWFLSIFINSMPLVFAFRIIDVFFLEGPKLLFQVALAILRINGERLLEADDDGLMIG
IIKEYFLTLDQSAHPTSKNEKLRSITKFQELMVVAMKEFSVITEPLITEQRAKYQDRVLE
DIEIFAKRTSIRNLHKTKNLSQDDLSVLYDRYHTYREMNLENYQNFLSSVVCWTEPQELS
IDGTPDFLRRLYTRWDADMKGTLSLQNVVTGIDALKQSDLMGLMTYFFELYDDDGDGQID
REGILSMSEGLLFLTKAWREGTVYTDGAPILDQISLVELDRREQERQELLQQEEIRLAEE
MEALRLEAEQQKLAEENTSEAIFDTPDTDEDDAKSTKSSKSAKSVSSRSIKSTIGSIGAA
GGAVSGAAIGAVRGAVRRKSFKDIGDPMQERQKVAHEQNVRYLSAVSAFIQRAFEYANEA
KKEADKEAAGDKGKDSEDSVEAHNAALDPSKPLFIDLPTFRMVVLADETLETLFAVSLPQ
SVILRQSDADRHKRASLRDVFDGLVADGMRVAGEVRKRIDIDKSVNDSEDIGEVVSGKDR
DVLDEAI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG