YALI0B01562g

Overview

Description weakly similar to uniprot|K4B221 Solanum lycopersicum PREDICTED: partner of Y14 and mago-like
Locus type CDS
Locus tag YALI0B01562g

Location

Species Yarrowia lipolytica Positions 246227..247010
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 784 (nuc.)
Previous locus YALI0B01540g Next locus YALI0B01584g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01562g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01562gYALI0B01562g_mRNA-001YALI0B01562g_CDS-001

Nucleotide sequence

 

>YALI0B01562g
ATGGCGTCCCTCACAGGAACATATGAAAAGGATGGAGAGAGAGTGGTGGGTGGAACAGTG
CGATCTGACGGCAGTGTGAGACCGATTGCCAAGGTGCGGCCTGGATACATTGCCAAAGAA
GATGTTCCAAAGTACAAGCCACGCGGGGCGAGAGAACGAGATGCCAGGTTGGGCATCGTG
TCTGCTGAGAGTCCGATCGCTAGGGTGGAGACCCAAGCAAGTGGTGCTGACGACAACAAG
TCGGCTATCAAGGCCCGAATCCAAGCTGCGAAGGCCGAGTTTGAGAGAAAGAAGCGCGAG
AAGGAGAAGGGGCCACGGAAGGAAGAGAAGCAGATGGTGGAGGAGAGTGTGATATTCGAC
AACAGCGGCAAGAGCCCCGATGATATCAGCAACATGATTGCCGCTGTTGATAATCTGGAT
ATCAGGTCGACTCCAGACACAACAGCACCAACAAAAACTTCAACCACCACAAGCAAGCTA
CAGTCGAAACACAAAAAGAGGGAGGACAAGACGGAAAGAAGCGATTCGACACAGATACAG
GTCGAGTCTCAGGCGGAGTCGGAATCCAAGTCTCAGGTCGAGTCCCCGACCAATCTCACT
ACCACCCCACAAAGTACTCAGAGGATTCCTCTCAAGTCCAGACATGCTAGAAAGGCAGAG
TCACCCACAGAGGAGAAGAGCTCAAACAATGCCAACAAAACCTCCGGGTACATTCCTCCA
CACAAAAGAAAGTAAAAAAGTAAAAATAGCAAAATATTTATTTCTCTATATATACAAGTA
CATA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0B01562g_CDS-001

Protein length: 245 aa.
Product: Conserved hypothetical protein

>YALI0B01562g_CDS-001 MASLTGTYEKDGERVVGGTVRSDGSVRPIAKVRPGYIAKEDVPKYKPRGARERDARLGIV
SAESPIARVETQASGADDNKSAIKARIQAAKAEFERKKREKEKGPRKEEKQMVEESVIFD
NSGKSPDDISNMIAAVDNLDIRSTPDTTAPTKTSTTTSKLQSKHKKREDKTERSDSTQIQ
VESQAESESKSQVESPTNLTTTPQSTQRIPLKSRHARKAESPTEEKSSNNANKTSGYIPP
HKRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG