YALI0B01034g

Overview

Description highly similar to uniprot|P56286 Schizosaccharomyces pombe Eukaryotic translation initiation factor 2 alpha subunit (eIF-2- alpha)
Locus type CDS
Locus tag YALI0B01034g

Location

Species Yarrowia lipolytica Positions 170554..171795
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1242 (nuc.)
Previous locus YALI0B01012g Next locus YALI0B01045r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01034g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01034gYALI0B01034g_mRNA-001YALI0B01034g_CDS-001

Nucleotide sequence

 

>YALI0B01034g
ATGGACGAAGTCAACACGACCACCTGCCGATTCTACGCCAACAAGTACCCCGAGGTCGAC
GACCTGGTGATGGTCAACGTCAAGGAGATTGCCGACATGGGCGCGTACGTCAAGCTGCTT
GAGTACGACGACATTGAGGGCATGATTCTGCTGTCGGAGCTGTCGCGACGACGTATCCGG
TCCATCCAGAAGCACATCAAGGTGGGCAAGAACGAGATTGTGGTTGTTCTGCGAGTGGAC
AAGGACAAGGGCTACATCGATCTGTCGAAACGGCGAGTGAGCGCCGAGGACGTGGAAAAG
TGTGAGGAAAAGTACACCAAGTCCAAGACTGTGCACTCGATTCTGCGGCACGTGGCGGAG
AAACACAAGTACTCGCTAGAAAAGCTGTACGAACAGGTGGGCTGGCCGCTGAGCACCAAG
TATGGCCATGCCTACGACGGCTTCAAGCTGTCCATCACCAACCCCGACCAGGTGTTTGGC
GATCTGGAGGACCCTGCTTCTCCCGCCATCATGGAGGATCTCAAGGCCCAGATTGGCCGG
CGACTGACCCCCAACCCCGTCAAGGTGCGAGCTGACATTGACATCACCTGTTTTGCCTAC
GAGGGCATTGAGGCGATCAAGAAGGCGCTGGCGGCCGGTGAGACGCTCAACTCGGAGCTG
GTGCCCGTCAAGGTCAAGCTGGTGGCCGCTCCTCTGTTTGTGCTCACCTCCACCTGTCTG
GACAAGCAGAAGGCCATCGACACTCTCGGCGAGGCGATTGAGAAGATTCGAGAGAGCATT
GAGGCGTCCGGCGGCTCTCTGACGGTCAAGATGGAGCCCAAGGCCGTCACTGAGACCGAC
GATGCCGAGCTCGCCAAGCTTATGGAGAAGACTGAGCAGCAGAACAAGCTGGTGGATGGA
GATGATGATGATGCTGACGAGGAGGCTGGCGATTTTGAGTGATTGCGTCAGCAATGTACA
GGACAGGAAGCAGAGGACTGCAGTGGAGGATAAAAGGAAGAGCATAGTCAAGGTGATATA
CCGATATTCCAACAGGCATGAGCGCAGCGCGTGAGTGGGTGCGCTTGTGAGTGCGAGACA
TCCAGGGCTCCGTGTAGCCCGTGGATTGTAACTGTAGTCAGTAGGGATACTTGTTATTGG
CGTTGATAGTTGTAGCTAAGGTTGATTAGTCAGCGTGTAGAATCTTTGTAATATCTCTGA
GGAGATACCAATCCGAGGTTACCTGAAGAGCGTTTGATTTCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01034g_CDS-001

Protein length: 314 aa.
Product: Eukaryotic translation initiation factor 2 alpha subunit (eIF-2- alpha), putative

>YALI0B01034g_CDS-001 MDEVNTTTCRFYANKYPEVDDLVMVNVKEIADMGAYVKLLEYDDIEGMILLSELSRRRIR
SIQKHIKVGKNEIVVVLRVDKDKGYIDLSKRRVSAEDVEKCEEKYTKSKTVHSILRHVAE
KHKYSLEKLYEQVGWPLSTKYGHAYDGFKLSITNPDQVFGDLEDPASPAIMEDLKAQIGR
RLTPNPVKVRADIDITCFAYEGIEAIKKALAAGETLNSELVPVKVKLVAAPLFVLTSTCL
DKQKAIDTLGEAIEKIRESIEASGGSLTVKMEPKAVTETDDAELAKLMEKTEQQNKLVDG
DDDDADEEAGDFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG