YALI0B00880g

Overview

Description similar to uniprot|P22211 Saccharomyces cerevisiae YNL183C (ohnolog of YDL214C) NPR1 ser/thr protein kinase
Locus type CDS
Locus tag YALI0B00880g

Location

Species Yarrowia lipolytica Positions 145547..148350
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2804 (nuc.)
Previous locus YALI0B00869r Next locus YALI0B00902g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00880g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00880gYALI0B00880g_mRNA-001YALI0B00880g_CDS-001

Nucleotide sequence

 

>YALI0B00880g
TTCACCACACACACTGTTTGCAACCGTGACACAGAACCAGAGCACAGCGGCCCACGAGAT
ACTTGCACGTGACTTCCAGAGACAGTCCTATACATCACGTGATATCCGATAGCGAATACG
ACACACGACGCACTTGGCGAGAAGAGTGAGTTACACAATAAGGAGGGGGCCCGAGTTACA
AAGACGGAGCCGCTCCCCCGTCCCCCGTCACAGACACAAACGGGCAACGACGACGAAAAA
CAGAGATACTGACACATATAGACGAGTCACGTGACATTGACCAACCGACCGACCGACCGA
CCGACCGACCGACCGAGATTCATTTTTCCCGGGATTGTGACTCACGGGATTTATACAGTA
GTGACACAAGCAGACCAGAACGGCAGAAGCAAAGAACGGCGGAAACACAGCACGGTCAAC
GTTTGGGACGACAAGGCACGAGATTTAGAAAGAATACCGTGACATTGTCTGGACCTAGCC
ACTTTCTGGGCTTATTATTGAATCAGATCATTCCACCCCCAAGATCTGACGACACTTTGA
CTTGTTTCGACTCTTCGACTTTTTTTCGACTTTTCGACTCTTCGACTCTTTTCATCTCTT
TTCGATTCTTCGAAGCCCTTTCGACTCGTCACACAGATTTCTGGTTTCGGATTTTGACTC
AATCAACTCGACCGACACCTGAGATTCTACAATTGTTGGCAGTGGACCTCTATTGACCAA
TTAACTACCCATTATCTAGCAACAGCTAGCTCACACTTGCATCATGGACGACTTTAACAA
ACTCACGCTCACCGAGAGCCACACACCCTCGCCCCACAGCCCCGCCACGTCCCGCATCAA
CTCCAACAACAACGCCAACGGCACCTCGCGTACCTCGTCACGGTCCCACCGCCCGTCGGC
GGTGTTCCTGGGGGTTGCCAACGAAGACGGATTCGACTCACAGCCCGGCACCCCGTCGTC
GTCGTCGTCTTACACTTCTTTTGATAGAGCCGGAGGAGGAGCAGCAGCAGCAGGAAATAC
CACTCCAGGCGGTCCGGCAACTGGCGCCCCGGGTACCCCCGGTTTAGGTGGCCCCCTGGG
CCACAGCCAGGTCCACTTCAGTCTCGGCTCGCCGTCTCGTCCCGGATCAGTGGCGGGTTC
TCGACCTGGCTCCCGCCCGGGCTCCAGGCCAGGCTCCATCGCCCCCCAGGAGACGCAAAT
CTCGCTCTTCCCTGAGGCAGACGCACACGACCCGTACGCACGACAGCACCGACCACCACA
GGTGTCGCACCGCGACACTGATTCCATTGCGCCGCGGTTCCGGTTTGCGCGGAGCAGATC
ATCATCTCGGTCATCGCCGGACCGCCGGGTCAACACTGACGAGGCTTCCGGCAACTTTCA
CCGGTCCACGGGCTCCATGGCAGAGCTGAAGCGGTTCTTCAAGAAGAAGTCTTCCAAGCT
AAAGCCCAAGAGCAAGAGGGCGGAGTCCAAGGAGGACATTCCTCGGAGTCGGCCGGTGTC
CCAGTCGTCGCGAGCGACCCCGCCGGTCTCGCGCTCCTCTTCGCAGTCCAACATTGCGTC
GATCGGGTTCGGAAAGTGGGGTAAACCGGGCCGGGTGCTCGGGTCCGGAGCCGGCGGGTC
GGTCCGGTTGCTGCACCGCCAGAGCGATGGCAAGACGTTTGCGGTCAAGGAGTTCCGGCC
CCGCCACCAGCATGAGTCTGAGCGCGAGTACTCTAAAAAGGTGACGGCTGAGTTCTGCAT
CGGCTCCACTCTCCACCATCCCAACATTGTGGAGACTCTGGACATCATCCAGGACGACGG
CCGGTACTTTGAGGTGATGGAGTTTTGCCCGTACGACTTTTTTGCCATAGTCATGTCGGG
AAAAATGAGCCAGGCGGAGGTTGCGTGCTGCTTCAAGCAGTTGCTGAGTGGCGTCACCTA
TCTGCATTCGATGGGTCTGGCGCACCGCGACCTCAAACTCGATAACTGCGTCGTTACCAA
GGACGGTATTCTCAAGCTGATTGATTTCGGCTCTGCGTCGGTCTTCAAGTATCCGTTTGA
GACCGGCATTGTCATGGCCCATGGAGTAGTTGGTTCGGACCCCTATCTCGCCCCCGAAGT
GCTGTCGCAGACCAAGTATGATCCCACGCCGACAGACATCTGGTCGATCGCCGTGGTGTT
CTGCTGCATGACGTTGCGGCGGTTCCCCTGGAAGGCCCCCAAGCTGACGGACAACTCGTT
CAAGCTGTTTGTGTCGGAGCCGGAGGTGGACGAGACCGACAAGGCGACCAAGGGTCCGAT
GAGGCTGCTGAACCGGTTGCCGCGCGACTCGCGGCATATTATTGGCCGCATGTTGACGGT
CGACCCCAAGAAGCGCGCGACGCTGGAGGAGATCTGGGCCGATCCGTGGGTCCAGAGTAT
CAGTATGTGCACATATGATGATGACGGACGGCTGGTCAAGGGGGTAGGGCATGAGCATAC
ATTCGTGGAGGTGGAGGAGAGGGAGGAGCCGGAGACGAAGCCGTAGCTGCCACGCAGCCG
TAGCAGTCATGAAACCGAAGAAAGATCCGGAAGAGGCTGGAAACGCTGAAAGATCTGAAG
AAGCAGCAACCAATATCAACAAGGATACAAGAGATGCCTCGAGTCTCTGGAGACTAGGGC
CCAATCAGAGGTTGTACAGATGCAGAGGCTGCCTCAATGGTGCCATGCAATGCCTTTGGC
GTCAGGCTTCGGTGCAGTTCTTTAACTGCCGCTGCCTTGAATGCCACGCTTCAATGTATG
TAGCTAATGTATTATTTAAGTAATTGAGGTCACGTGTGATGTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00880g_CDS-001

Protein length: 581 aa.
Product: Serine/threonine protein kinase, putative

>YALI0B00880g_CDS-001 MDDFNKLTLTESHTPSPHSPATSRINSNNNANGTSRTSSRSHRPSAVFLGVANEDGFDSQ
PGTPSSSSSYTSFDRAGGGAAAAGNTTPGGPATGAPGTPGLGGPLGHSQVHFSLGSPSRP
GSVAGSRPGSRPGSRPGSIAPQETQISLFPEADAHDPYARQHRPPQVSHRDTDSIAPRFR
FARSRSSSRSSPDRRVNTDEASGNFHRSTGSMAELKRFFKKKSSKLKPKSKRAESKEDIP
RSRPVSQSSRATPPVSRSSSQSNIASIGFGKWGKPGRVLGSGAGGSVRLLHRQSDGKTFA
VKEFRPRHQHESEREYSKKVTAEFCIGSTLHHPNIVETLDIIQDDGRYFEVMEFCPYDFF
AIVMSGKMSQAEVACCFKQLLSGVTYLHSMGLAHRDLKLDNCVVTKDGILKLIDFGSASV
FKYPFETGIVMAHGVVGSDPYLAPEVLSQTKYDPTPTDIWSIAVVFCCMTLRRFPWKAPK
LTDNSFKLFVSEPEVDETDKATKGPMRLLNRLPRDSRHIIGRMLTVDPKKRATLEEIWAD
PWVQSISMCTYDDDGRLVKGVGHEHTFVEVEEREEPETKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG