YALI0B00110g

Overview

Description some similarities with uniprot|P40072 Saccharomyces cerevisiae YER116c subunit of the HEX3P-SLX8P complex, required for cell growth in the absence of SGS1 or TOP3
Locus type CDS
Locus tag YALI0B00110g

Location

Species Yarrowia lipolytica Positions 234..816
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 583 (nuc.)
Previous locus YALI0B00101t Next locus YALI0B00132g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00110g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00110gYALI0B00110g_mRNA-001YALI0B00110g_CDS-001

Nucleotide sequence

 

>YALI0B00110g
ATGCCTGAGTCGCCGAAATACATCTCAGATGATTCTCCAACCGACACATACGCCCCACAA
GCGCCACCAGAGGTGATTGACCTGGACGAATACGACACGCAAAGCGAGTCGGAACATGGA
TCCGATGCGGAGTCGGATGATCTGATCCTTACGACGAAACCGGCTGTCCAGTACAACAAG
CTGCGGGAGCTCAAGTGTCCCATCTGTCTCGATCCGCCCAAAGTCCTTTGTGTGACTCCC
TGTGGACACATTTATTGTGGGGACTGTATCTACACGGCTCTATCGTCCGGAGTTCGAGCG
ACGCAATTGAAGGGAGAGTGCAGCATTTGCAGAAAGAAGGTCGCTTACAACTCCATTGTT
TACTTGGAAGCCAGACTGGGGAAGGAGAAGGAAGACTCAGAGGAGAGCGACAACGATGAC
GGAGACGATGACGGAGACGATGAGGAGGAGTCAGCTGAAGTTGGATCTCCCGTGGAAGAT
AGAAGAGCCGTCAAGGTCGAAAGGCGACGGTTACAAACACTAACAAGATGACACGCGTCC
AGAGCGGACCTTCATAGTTGCATTATATATTTATTGACTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00110g_CDS-001

Protein length: 177 aa.
Product: Conserved hypothetical protein

>YALI0B00110g_CDS-001 MPESPKYISDDSPTDTYAPQAPPEVIDLDEYDTQSESEHGSDAESDDLILTTKPAVQYNK
LRELKCPICLDPPKVLCVTPCGHIYCGDCIYTALSSGVRATQLKGECSICRKKVAYNSIV
YLEARLGKEKEDSEESDNDDGDDDGDDEEESAEVGSPVEDRRAVKVERRRLQTLTR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG