YALI0F31339g

Overview

Description similar to uniprot|W6YU38 Bipolaris oryzae hypothetical protein COCMIDRAFT_39018
Locus type CDS
Locus tag YALI0F31339g

Location

Species Yarrowia lipolytica Positions 3901667..3902256
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 590 (nuc.)
Previous locus YALI0F31317g Next locus YALI0F31361g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31339g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31339gYALI0F31339g_mRNA-001YALI0F31339g_CDS-001

Nucleotide sequence

 

>YALI0F31339g
ATGAGCAAGAAATCGTTGGCCGCCGTTGGAACGCCACTGGATGAGCTGAAGGAGAACCAG
ACCATCGCCAAGGTCGCCCAGGCCAAGGGCAGCAACATATACGAGGTGACTCTGCCTCAA
GACTTCTACAAGAGCCACGGGTTCAAGAGCCCAGAGGTCCAGGTTGAGATGCCACCCAAG
TTCAGACAGACCGTGTGGGTCAAGCGGGGTGGCTTTGTTGTTGTTGACGTGACTCCCGAT
GACAAGATTGCCGGTGATATCATCGAGATCGTGGTGGACGATCGCACATGGCGAAAAATG
CCCTACTGGCCCGCCGAGTTCAAGAAGGTCGGTGGATGGCAGCAGGATTCCGACGAGGAG
GAGGCCGATCCCTTTGCTCTTCCTGACGACGAGTCTGATGAGGAGGAATACGAGGAGGAG
CAGAGTTAGGGGGTGAAGGGGTTCTAAGCGGTGTATATATACTGGAGATGATATACAGTT
GGACACCTTCTCTCTGTCACACGACCTGACGCAACAGCTAGACCCATGTCAGAGTCGTTC
AAAAACTACAGCATGTAGCTAATCTTTAATACATTCATATAATAAAGCAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31339g_CDS-001

Protein length: 143 aa.
Product: Conserved hypothetical protein

>YALI0F31339g_CDS-001 MSKKSLAAVGTPLDELKENQTIAKVAQAKGSNIYEVTLPQDFYKSHGFKSPEVQVEMPPK
FRQTVWVKRGGFVVVDVTPDDKIAGDIIEIVVDDRTWRKMPYWPAEFKKVGGWQQDSDEE
EADPFALPDDESDEEEYEEEQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG