YALI0F31317g

Overview

Description similar to uniprot|P33201 Saccharomyces cerevisiae YKL009w MRT4 mRNA turnover 4
Locus type CDS
Locus tag YALI0F31317g

Location

Species Yarrowia lipolytica Positions 3900754..3901516
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 763 (nuc.)
Previous locus YALI0F31295g Next locus YALI0F31339g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31317g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31317gYALI0F31317g_mRNA-001YALI0F31317g_CDS-001

Nucleotide sequence

 

>YALI0F31317g
ATGCCCAAGTCAAAGAGAAACAAGGTCATCGCTCTCACCAAGGTCGAGAAGAAGACCCGG
GAGGACAAGGAGGTGATCGTCGACGAGATCCACAACTACCTCGACGAACACAAGTACTGC
TTTGTCTTCTCAGTAGAGGGCATGCGAAACACCTTTTTCAAGGATCTCAGAGCGGACTGG
AAGGGCAGCAGAATATTCTTTGGCCGAACCAAGATCATGGCCAAGGCTCTCGGCAAGTCT
GAGGAGGATGAGTACAAGGCTGGACTCGGCGCACTGTCTGAGTACATGTCTGGAGATGTT
GGTCTTCTGCTGACCGACGAGGAGCCCCAGGTCGTCAAGGATTACTTTGAGTCTTTCGTT
CGGGAGGACTATGCACGAGCCGGCCAGGTCTCTACCGTTACTTTCACAATCCCCGCCGGC
GTTGTCCATACCACCGGAGGTAAGATCCCCGCTGAGGACGATGTTCCCGTTGTGCATTCT
ATGGAGCCCACTCTCCGATCTCTGGGTATGCCCACTCAGCTCAAGGCCGGAAAGGTGGAG
CTGTTCGCCCCCTACGAGGTCTGCAAGACTGGCCAGACTCTGGATTCTCGACAGACCCGT
TTGCTCAAGCACTTTGGCGTCACCAGCTCTTTCTTCAAGGTCCACACTGTGGCCTACTAC
GACTCTGAGAAGGAGGAGGTTAAGCCCTTCATTTCCGCTTAGATGTCTCGGAACATATTA
ATCAATCATTAGACACGTTTCAATAGAATAACTATGGGAGGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31317g_CDS-001

Protein length: 234 aa.
Product: Protein involved in mRNA turnover and ribosome assembly, putative

>YALI0F31317g_CDS-001 MPKSKRNKVIALTKVEKKTREDKEVIVDEIHNYLDEHKYCFVFSVEGMRNTFFKDLRADW
KGSRIFFGRTKIMAKALGKSEEDEYKAGLGALSEYMSGDVGLLLTDEEPQVVKDYFESFV
REDYARAGQVSTVTFTIPAGVVHTTGGKIPAEDDVPVVHSMEPTLRSLGMPTQLKAGKVE
LFAPYEVCKTGQTLDSRQTRLLKHFGVTSSFFKVHTVAYYDSEKEEVKPFISA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG