YALI0F31207g

Overview

Description similar to uniprot|P23644 Saccharomyces cerevisiae YMR203w TOM40 forms the hydrophilic channel of the mitochondrial import pore for preproteins
Locus type CDS
Locus tag YALI0F31207g

Location

Species Yarrowia lipolytica Positions 3888866..3890052
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1187 (nuc.)
Previous locus YALI0F31185g Next locus YALI0F31229g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31207g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31207gYALI0F31207g_mRNA-001YALI0F31207g_CDS-001

Nucleotide sequence

 

>YALI0F31207g
ATGTCGACTGCCGTCCCGTCTCTCGGAGAAATCAACGCTCTCAACGTGCCCTCGCTCCCG
GGCAACCTGAACACACCCAATCAGACCCCCGCCTGGACCAACAACCCTCTGTGGGCTTAT
GTTTCCGAGACCTACAACACCATTGCCGCCAAGCGAAGCGGCCTGAACCTGGTTAACCCC
GGCACTCTCGAGAACCTCAACAAGGAGGTGTCCAAGGATGTTTTCCTCACCAACTACTTC
TTCACTGGTCTGCGAGCCGAGATCTCCAAGACCTTCAGCATGAACCCCGCCTTCCAGGTG
TCCCACTCCTTTTCTCTGGGCTCCAAGGTGCTCCCCCCTTACGCCTTTGCTGCTTTCTTC
GCCAATGACAACTTCTTCATGCAGGGCAACATTGACAATGATTACTCTGTCGCCGCCCGA
ATGCAGTACTCCTGGTCTAAGGAGTGTGTCTCCAAGGTGAACGCCCAGCTGCAGAACGGC
CAGCCCGCCATGATTCAGCTCGAGCAGGATCTGCAGGGAGCCGACTTCTCCATCAACTTC
AAGTCCCTCAACCCCTCCGTTCTCTCCGGCGGTCTCTCCGGTGTCTTCATTGGATCTCTG
CTCCAGTCTCTGACTCCCAAGCTCGCCGTTGGTCTCGAGGCCATGTACTCTGCCCAGGAC
CCCCGAATCGGAGAGGCTGCTGTTTCCTACTTCGGCCGATACGTGTCTGGCGACTGGGTT
GCCTCCGCACAGCTCCAGCAGATGGGTATGGTCCAGGCATCTTTCTGGCGAAAGATCACC
GACAAGGTCGAGGCTGGTGTTGAGGCCAACCTGGCCCTGCTCGGCAAGCCCAACCCCATG
ATGGGCGGTGTCTCCGGCCCCGAGGGAACCACCACCATCGGCGCCAAGTACGAGTTCCGA
CAGTCTGTCTTCCGAGGACAGATTGACTCCACCGGAAAGGTTTCCTGCCTCCTCGAGCGA
CGTGTCCTCCCCGTTGTCTCTCTGCTCTTTGCTGGAGAGATTGACCACGTTGCTAACACT
TCCAAGGTTGGTCTCGGACTCCAGTTCGAGGCTGGTGCCGACGAGGAGATGATGGCTCAG
CAGCAGCAGATGATGGAGCAGCAGCAGATGATGGAGCAGCAGCAGCAGATGTAAATAGTA
GATAGATAGTGCTGTATCAATATCATGAACGATCGTACCATATTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31207g_CDS-001

Protein length: 378 aa.
Product: Component of the TOM (translocase of outer membrane) complex, putative

>YALI0F31207g_CDS-001 MSTAVPSLGEINALNVPSLPGNLNTPNQTPAWTNNPLWAYVSETYNTIAAKRSGLNLVNP
GTLENLNKEVSKDVFLTNYFFTGLRAEISKTFSMNPAFQVSHSFSLGSKVLPPYAFAAFF
ANDNFFMQGNIDNDYSVAARMQYSWSKECVSKVNAQLQNGQPAMIQLEQDLQGADFSINF
KSLNPSVLSGGLSGVFIGSLLQSLTPKLAVGLEAMYSAQDPRIGEAAVSYFGRYVSGDWV
ASAQLQQMGMVQASFWRKITDKVEAGVEANLALLGKPNPMMGGVSGPEGTTTIGAKYEFR
QSVFRGQIDSTGKVSCLLERRVLPVVSLLFAGEIDHVANTSKVGLGLQFEAGADEEMMAQ
QQQMMEQQQMMEQQQQM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG