YALI0F31141g

Overview

Description similar to uniprot|Q06151 Saccharomyces cerevisiae YLR270W (ohnolog of YOR173W) Scavenger mRNA decapping enzyme
Locus type CDS
Locus tag YALI0F31141g

Location

Species Yarrowia lipolytica Positions 3885018..3886188
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1171 (nuc.)
Previous locus YALI0F31119g Next locus YALI0F31163g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31141g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31141gYALI0F31141g_mRNA-001YALI0F31141g_CDS-001

Nucleotide sequence

 

>YALI0F31141g
ATGAACAGAGTCCGAGACTTTCAATTCACGCAATTGCTCAACTTCAACAGCCAGTCAAAG
ACCGTGACGCTGTTGGGTACGATTGGCGACGACAATGCGATCTTGACGGTTGAGAAACTG
CCATTTGAAGTTACCGATGAAGCGTACTTAAAACAGTTTGCCTCGCCAGACATCTTTCCA
GAGGTCAAGCAGCTCGAAAATAACGACGTGTACCACTGGAACCTCGCCACTCTCGCGCAG
GACGTGAATAAGCGGCCCGGAGTCAAGATCAACCTCATTTACCCAGCATCCGAAACACAT
GTTCAAAAGTATTCGCAGCAGCAAACTCGAATGGTGGTCGAGACCCCTGAGCTGTATCAG
CAGGTTACTTGGCCATACATTGAGACTCAGCTCGGAAGCCGAATCCAGTGGGTACATAAC
ATTCTGTACCATGGCAAGGAGGCGGAAGATGTGGTGTATCGAAAGGAGGATTCGTTTGTT
CTTCTACCTGACATGAAATGGGACAGAAAGAATGTCAACTCCTTGTATTTGGTAGCTATC
TCTTTGAGAAACCTCGAGGGCCAGGGAGAGAGTGGAAAGCCCATTACTTCTATCAGAGAT
CTCAACCACTCTCACATACAGTGGCTCAAGGAGCTCAGAGAAGACATATACAAGGTGGTC
AAAGACAAGTATAATGTCGACAGGTCCTTTCTGCGGGTCTTTGTGCACTACCAGCCCTCT
TACTACCATCTCCACGTCCATGTAGTCCATATCAACAACGAGGGTCTTGGAAGCAGTCAG
CTGGTTGGCAAGGCCATCTTGTTAAACGACGTTATTGATGATCTTGGTTTCCTTGGAGAA
AAGGGATACAGTCAGAAGACTCTCACTTACGCTCTTGGTGAGAACCATAAGCTCTGGACT
GCCATCAAAGCACACACAGAGGCTTAGGCTTACTGTGATTATATATCTATAGGTAGACTC
ATCGGCTAAATGTTTAAAATGTATTATGTTAGAATGCTAGGCTATCAGTTAGTAGCCAAT
TCGTCCTTGAAGGAGAAGGGCTCGTAGGGAGTGCCCTCACCCTCGAAGAACTTGGACATG
GACTCAACCCAATGCAGACGAAGAGAATGCAGCATGGCCGAAGTACCCTCCATACAGACC
AGAATAACCACGGTGAGCACAAACCACATTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31141g_CDS-001

Protein length: 309 aa.
Product: Non-essential hydrolase involved in mRNA decapping, putative

>YALI0F31141g_CDS-001 MNRVRDFQFTQLLNFNSQSKTVTLLGTIGDDNAILTVEKLPFEVTDEAYLKQFASPDIFP
EVKQLENNDVYHWNLATLAQDVNKRPGVKINLIYPASETHVQKYSQQQTRMVVETPELYQ
QVTWPYIETQLGSRIQWVHNILYHGKEAEDVVYRKEDSFVLLPDMKWDRKNVNSLYLVAI
SLRNLEGQGESGKPITSIRDLNHSHIQWLKELREDIYKVVKDKYNVDRSFLRVFVHYQPS
YYHLHVHVVHINNEGLGSSQLVGKAILLNDVIDDLGFLGEKGYSQKTLTYALGENHKLWT
AIKAHTEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG