YALI0F31119g

Overview

Description similar to uniprot|P32563 Saccharomyces cerevisiae YOR270c VPH1 H+-ATPase V0 domain 95K subunit
Locus type CDS
Locus tag YALI0F31119g

Location

Species Yarrowia lipolytica Positions 3882687..3885231
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2545 (nuc.)
Previous locus YALI0F31108t Next locus YALI0F31141g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31119g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31119gYALI0F31119g_mRNA-001YALI0F31119g_CDS-001

Nucleotide sequence

 

>YALI0F31119g
ATGCCCGAATCCAACCAGTCTGGCGAGGCCATTTTCCGTGAGTACTATGCGAACATGTGG
CTCGAGTGAAACATACGTGACCCGTCCATTGCCACAACAACTCGTCTCATACTAACCCAG
GCTCTGCGGAGATGTCGCTGGTTCAGCTGTACATTGCCAGTGAAATTGGACGAGAAACGG
TTATGTCTCTGGGCGAGCTTGGACTCGTGCAATTCCGAGACCTCAACAAGAAGGTCAATG
TCTTTCAGCGAAACTTCATCCAGGAGGTCCGACGACTCGACAATGTCGACCGACAGCTGC
GTCTGTTTGAGCGAGAATGTGAAAAGGAGGGACTAACCCTCGAGGACGGCGATCCCCACA
GTGCTGCTTCTGCCTCCGACATTGATGCCCTGGTGGCTCTGGGCGATACTCTCGAGAAAC
GAATCACCGAACTTCGAGACGCCGAGGAGCGAGTCACTGAATCTCAGACCGAGTCGCAGG
AACTGCGAGCTGTGCTCACCGAAACCGCCAAGTTTTTCGACCAGCGAGCCGGAGGCGGCA
GCCGGGACATTGAGTCGCAATCTCTGCGAAACGTCCAGTTTGTTGCTGGAGTTATTCCCC
GAGACCGAGTCGAGGTGCTGGAGCGAATTCTGTGGCGAGTGCTGCGAGGAAACCTGTTCC
TCGAGACCGCTGAGTTTGGAGGAGACGACGGAGACAAGTCCGTGTTCATTGTGTTCTCCC
ACGGAGCGGAAATCATCTCCAAGGTGGAGCGAATCGCCAAAACTCTGGACGCCCACCTGT
ACTGGATTGCCGATGATGTTCGAGAACGAGAGAACCAGCTCCAGGAGGTCAACCAGAAGC
TGTCCGACATCGATATTGTGTCGCAGCGAACCCGACACACCCTTAACACCGAGCTTCGTC
TGATTGCCCAGAAGCTGCCCAACTGGCGAGTCATTGTCATCAAGGAAAAGAGCGTATACT
CTACTCTCAACCTGTTCCAGTACGACACCAACCGAAAAGTGCTCATCGGCGAAGGCTGGG
TGCCCAAGGACGACATTTCCAAGGTCAAGACCACCCTCAAGTCCATCACCGACGAGGCTG
ACGTCGAGATCCCCTCTGTTCTTAACGTCCTCGAAACCTCTCGAACCCCTCCCACTTACC
ATCGAACCAACAAGTTCACTTCGGCCTTTCAGCTCATTGTCGACGCTTACGGTATCTCTT
CTTACCGAGAAGTCAACCCCGGTCTGCCTACCATCGTCACCTTCCCCTTTATGTTCGCTA
TCATGTTTGGTGACATTGGCCACGGGTTCATTCTCTTCCTGGCCGCCTTTGCCCTGGTCT
ACTATGAAGCCAAGATTGGCAAGATGAAGCGAGACGAAATCTTCGACATGGCCTACCAGG
GACGATACATTCTGCTGCTCATGGGAGCCTTCTCCATGTACACCGGATTCATGTATAACG
ATATCTTCTCCAAATCCATGACCCTGTTCAAGCCCGGATGGGCCTGGCCCGAGTCGTGGA
AGGAGGGACAGACCATCCAGGCTCACCAGACCGGCGTCTACGCCTTTGGTCTGGACCCCA
CCTGGCACGGAACCGACAACAACCTGTTGTTCACCAACTCTTACAAGATGAAGCTGTCCG
TCCTCATGGGCCACGTGCATATGACCTATTCCTTCTTCCTGTCTCTTGTCAACTACATCT
TCTTCGGCTCTGTTGTCGACTTCTGGGGTAACTTTGTGCCAGGTCTGCTCTTCATGCAGG
GTATCTTTGGTTACCTTGCCCTTACTATTGTGTACAAGTGGACTGTGGACTGGGTCGCCA
TTGGCCAGCAGCCCCCCTCTCTGCTTGATACCCTCATTAACATGTTCCTAGCTCCCGGTA
AGGTCCCTGTGCCTCTGTACCCCGGCCAGGCATATGTTCAGGTCATTCTCGTTGTCATCG
CTCTCATCTGTGTGCCCTGGCTGCTGCTTGTCAAGCCTCTGTGGCTACGACGAGACATGC
AGAAGCATGAGTACGAGCGGGTATCTGGCAACGGCGGTCCTCTAGACCTGCTTGATGCCC
CCGATCAGCTCGAAGAGACTGTCGGAGACACTCCTGGAGACGCCACCGGAGGAGACGACT
TTGATGATGAGGAGGAGGAGGAACATGGATTTGGTGACATTGTCATTCATCAGGTCATCC
ACACCATTGAGTTCTGCCTCAACTGTGTGTCCCATACAGCCTCATACCTGCGACTGTGGG
CTCTGTCTCTTGCCCATGCCCAGCTGTCTACTGTTCTGTGGGACATGACCCTGCAGGCCG
CCTTTGGCTTCTCCGGAGTCGTGGGTGTCATAATGACCGTTATTCTCTTTGGAATGTGGT
TTGTGCTCACCGTGGTTATTCTGGTCTGTATGGAGGGTACTTCGGCCATGCTGCATTCTC
TTCGTCTGCATTGGGTTGAGTCCATGTCCAAGTTCTTCGAGGGTGAGGGCACTCCCTACG
AGCCCTTCTCCTTCAAGGACGAATTGGCTACTAACTGATAGCCTAGCATTCTAACATAAT
ACATTTTAAACATTTAGCCGATGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31119g_CDS-001

Protein length: 805 aa.
Product: Subunit a of vacuolar-ATPase V0 domain, putative

>YALI0F31119g_CDS-001 MPESNQSGEAIFRSAEMSLVQLYIASEIGRETVMSLGELGLVQFRDLNKKVNVFQRNFIQ
EVRRLDNVDRQLRLFERECEKEGLTLEDGDPHSAASASDIDALVALGDTLEKRITELRDA
EERVTESQTESQELRAVLTETAKFFDQRAGGGSRDIESQSLRNVQFVAGVIPRDRVEVLE
RILWRVLRGNLFLETAEFGGDDGDKSVFIVFSHGAEIISKVERIAKTLDAHLYWIADDVR
ERENQLQEVNQKLSDIDIVSQRTRHTLNTELRLIAQKLPNWRVIVIKEKSVYSTLNLFQY
DTNRKVLIGEGWVPKDDISKVKTTLKSITDEADVEIPSVLNVLETSRTPPTYHRTNKFTS
AFQLIVDAYGISSYREVNPGLPTIVTFPFMFAIMFGDIGHGFILFLAAFALVYYEAKIGK
MKRDEIFDMAYQGRYILLLMGAFSMYTGFMYNDIFSKSMTLFKPGWAWPESWKEGQTIQA
HQTGVYAFGLDPTWHGTDNNLLFTNSYKMKLSVLMGHVHMTYSFFLSLVNYIFFGSVVDF
WGNFVPGLLFMQGIFGYLALTIVYKWTVDWVAIGQQPPSLLDTLINMFLAPGKVPVPLYP
GQAYVQVILVVIALICVPWLLLVKPLWLRRDMQKHEYERVSGNGGPLDLLDAPDQLEETV
GDTPGDATGGDDFDDEEEEEHGFGDIVIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQ
LSTVLWDMTLQAAFGFSGVVGVIMTVILFGMWFVLTVVILVCMEGTSAMLHSLRLHWVES
MSKFFEGEGTPYEPFSFKDELATN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG