YALI0F31075g - LYS1

Overview

Description uniprot|Q12726 Yarrowia lipolytica YALI0F31075g LYS1 Homocitrate synthase
Locus type CDS
Gene name LYS1
Locus tag YALI0F31075g

Location

Species Yarrowia lipolytica Positions 3878317..3879770
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1454 (nuc.)
Previous locus YALI0F31053g Next locus YALI0F31097g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31075g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31075gYALI0F31075g_mRNA-001YALI0F31075g_CDS-001

Nucleotide sequence

 

>YALI0F31075g
ATGTGCGCAACAGATAACGCCCCCGCCGCTAACGCTGCTCCTGAGAAGCCCTCCAACGTT
GGAGTCGAGGTCGGTCACACCGGCGAGCAGACTAATCCTTACGGAGCCAACCCCGCCGAT
TTCCTTTCTAACGTGTCCAAGTTCCAGCTCATCGAGTCCACTCTGCGAGAGGGAGAGCAG
TTTGCCTCTGCCTTCTTTGACACCGAGACCAAGATCGAGATTGCCAAGGCTCTGGACGAC
TTTGGTGTCGACTACATCGAGCTGACCTCCCCCGCAGCATCGGAGCAGTCGCGGTCCGAT
TGCGAGGCCATCTGCAAGCTCGGTCTTAAGGCCAAGATTCTCACTCACATCCGATGCCAC
ATGGACGACGCAAGACTCGCTGTCTCCACCGGTGTCGATGGTGTCGATGTCGTCATTGGT
ACCTCCCAGTTCCTGCGACAGTACTCCCACGGCAAGGACATGAACTACATTGCACAGTCC
GCTGTCGAGGTCATTGAGTTTGTCAAGAGCCACGGCATTGAGATCCGATTCTCCTCCGAG
GATTCTTTCCGATCCGACCTGGTCGATCTCCTCAACATCTACCGAACTGTCGACAAGATT
GGTGTCAACCGAGTCGGTATTGCTGACACTGTTGGATGCGCCAACCCCCGACAGGTCTAC
GAGCTTGTCCGAACCCTCAAGTCCGTTGTCTCGTGCGACATTGAGTGCCATTTCCACAAC
GACACCGGCTGTGCCATTGCCAACGCCTACACCGCCCTCGAGGCTGGTGCCAACCTCATC
GATGTCTCCGTTCTCGGTATCGGTGAGCGAAACGGTATCACCTCTCTCGGTGGTCTGATG
GCTCGAATGATTGCTGCTGACCGAGACTACGTTCTCTCCAAGTACAAGCTGCACAAGCTG
CGAGACCTCGAGAACCTCGTCGCCGACGCCGTCCAGGTCAACATCCCCTTCAACAACCCC
ATCACCGGTTTCTGCGCCTTCACCCACAAGGCCGGTATCCACGCCAAGGCCATTCTCGCC
AACCCCTCCACTTACGAGATTCTCAACCCCGCCGATTTCGGTCTGACCCGATACATCCAC
TTTGCCAACCGTCTTACCGGCTGGAACGCCATCAAGTCGCGAGTTGACCAGCTCAACCTG
CACCTGACCGACGCCCAGTGCAAGGATGTCACTGCCAAGATCAAGAAGCTTGGTGACGTT
CGATCTCTCAACATTGACGATGTTGACTCCATCATCCGAGAGTTCCACGCCGATGTCACC
AGCACTCCCACCGTTGCTGCCACCGAGGGACCTGCCGTTGAGGACGAGCCCGCCGCCAAG
AAGGCCAAGACTGAAGAGTAAGGTGTTCTTATTTTCAGTGTAAATTATAGCATGTAAAAT
AACACACGCAAACTGGAGGACACAGTCCGAGGGTTTGTATATATCGATTATACGGAGACA
TATTCGAGGGTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31075g_CDS-001

Protein length: 447 aa.
Product: Homocitrate synthase
Gene: LYS1

>YALI0F31075g_CDS-001 MCATDNAPAANAAPEKPSNVGVEVGHTGEQTNPYGANPADFLSNVSKFQLIESTLREGEQ
FASAFFDTETKIEIAKALDDFGVDYIELTSPAASEQSRSDCEAICKLGLKAKILTHIRCH
MDDARLAVSTGVDGVDVVIGTSQFLRQYSHGKDMNYIAQSAVEVIEFVKSHGIEIRFSSE
DSFRSDLVDLLNIYRTVDKIGVNRVGIADTVGCANPRQVYELVRTLKSVVSCDIECHFHN
DTGCAIANAYTALEAGANLIDVSVLGIGERNGITSLGGLMARMIAADRDYVLSKYKLHKL
RDLENLVADAVQVNIPFNNPITGFCAFTHKAGIHAKAILANPSTYEILNPADFGLTRYIH
FANRLTGWNAIKSRVDQLNLHLTDAQCKDVTAKIKKLGDVRSLNIDDVDSIIREFHADVT
STPTVAATEGPAVEDEPAAKKAKTEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG