YALI0F31031g

Overview

Description similar to uniprot|Q08685 Saccharomyces cerevisiae YOR250c CLP1 cleavage/polyadenylation factor IA subunit
Locus type CDS
Locus tag YALI0F31031g

Location

Species Yarrowia lipolytica Positions 3869115..3870512
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1398 (nuc.)
Previous locus YALI0F31020g Next locus YALI0F31053g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31031g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31031gYALI0F31031g_mRNA-001YALI0F31031g_CDS-001

Nucleotide sequence

 

>YALI0F31031g
ATGTCGCTACCTGGCCTCAACTTCTCAACAACTGAGACAAACACTACAGAATCCACTCAT
ACCATCGACCTCAAACCAGAGACGGAATGGAGATACGAAGTGGCCATCGGGGGAACCTTA
CATGTCACGCTGAAATCTGGAACCGCTGAAATCTTCGGTACAGAGCTGCCACCTAACAAG
GAGCTCAGTATCCAAGGAAAAGGAAGCATTTACACATGGCAGGGCTGCCAGTTCGTATAC
ACGGCAATTGCAGGACCCAAGGGATTGATGTCTGATTACACAACCGAAGACACTCCCCAC
ATGACCATGGCTATCAACCTGCACTTTGCTCTGGAGAAGATGCGGAATGAGGCTGAACAG
AAGCCCAAGGACGTTGCTGGACCTAGAGTTCTCATTGCTGGACCCCCCAACTCGGGCAAA
ACCTCCCTGGCTAAGATTTTGTTAGCCTATGCTACAAAATGTGATCGAAAGCCCATATAT
ATTTCTTTGGATCCTACTTCGGTGAACCTGGGACCTCCTGGAGGAGTGCATGCTGTCCAA
ATTACAGATCTGCTAGATGTGGAAACATATGGAGGATTCGGATCATCGGAAATTTCAGGC
CCTCAGAAACTACAGCCTCTTATTTTGCTCTCCAAGTACTTTGGACTTGAGAAGACTACG
GATAACTTCAAGCTCTTCAAGCGGTCTGTGGCTCAGCTAGCAGTTCCCGTCCTGTCCAAA
CTTGCACACGACGTTGAGGCGCAAAAGTCTGGTCTCATCATCGACACTCCTCGAGTACCC
GGCAACCAAAACAAAACAATCGAAGTTAACCTGCTAACGGACGTGGTGAGCGACTTTGGA
GTCAACGTCATTGTCGTTATTGGCAACGATCGACTTTATGCAGACCTCATGAAGAAATAC
CCAGTGGGAGCCTCCGGTCCCACAGTAGTTAAGGTACCAGCATTTGCTTGCATGGATGAC
GATGAGAGCTACAACCGAGATGCCCAGCAACAGGAAATTCAGCAGTATTTTTATGGAGAT
GCTAAAGATATGAAACTTGGTCCACGAATCGTCACTGTCGATTTCTCTACTCTCCACGTT
TACAAGATCAAGCCTTCCACACAGTTTGACGATGACAAGGCGGATATGCTGGAGAGGGTC
GCAGAGGCCAACATTCTACCAAACACAGTACTGACGGTCATGCACGCTGTTCCTGGCTCG
TCCGAAAAAGAGATTCTCGACTCAGAGGTCCAAGGTTACCTTCACGTGACGGAGGTGGAC
GAGGAGAAGAACAAGGTGAAGATTCTGACTCCTGTTCCTGGACGACTACCCTCCCAGGTC
ATGCTTCTTGGTGATACACGATACCATGAGTAATACGATAGATATATAATGTAGATAATG
TATTTGTATATATGGGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31031g_CDS-001

Protein length: 451 aa.
Product: Component of the cleavage and polyadenylation factor I (CF I), putative

>YALI0F31031g_CDS-001 MSLPGLNFSTTETNTTESTHTIDLKPETEWRYEVAIGGTLHVTLKSGTAEIFGTELPPNK
ELSIQGKGSIYTWQGCQFVYTAIAGPKGLMSDYTTEDTPHMTMAINLHFALEKMRNEAEQ
KPKDVAGPRVLIAGPPNSGKTSLAKILLAYATKCDRKPIYISLDPTSVNLGPPGGVHAVQ
ITDLLDVETYGGFGSSEISGPQKLQPLILLSKYFGLEKTTDNFKLFKRSVAQLAVPVLSK
LAHDVEAQKSGLIIDTPRVPGNQNKTIEVNLLTDVVSDFGVNVIVVIGNDRLYADLMKKY
PVGASGPTVVKVPAFACMDDDESYNRDAQQQEIQQYFYGDAKDMKLGPRIVTVDFSTLHV
YKIKPSTQFDDDKADMLERVAEANILPNTVLTVMHAVPGSSEKEILDSEVQGYLHVTEVD
EEKNKVKILTPVPGRLPSQVMLLGDTRYHE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG