YALI0F30987g

Overview

Description similar to uniprot|Q9HDP7 Emericella nidulans Catalase
Locus type CDS
Locus tag YALI0F30987g

Location

Species Yarrowia lipolytica Positions 3862557..3864341
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1785 (nuc.)
Previous locus YALI0F30965g Next locus YALI0F31009g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30987g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30987gYALI0F30987g_mRNA-001YALI0F30987g_CDS-001

Nucleotide sequence

 

>YALI0F30987g
AGTGAGTACCCAGGAGGACTGTTTGGACGGGCAATTCGATACCGGGAAAGCAGCCCCATG
GACGCAGCGGGTTGATTCGGATGATCTGGTGGTTTCACGGGCTATAGATATTGCCCCATC
AATGAGGGGAAGACGCTCAAGTCCGAACACCGCAACATAATACGACAGTGGTGATAGACA
ACTCGCCTAAAGCCAACAACAACAACACCAATAGCATACTAACTCAGTGTCTGGAAAACG
AGTCCCCACTTACACCACCACTAACGGTAACCCCGTCAAGGACCCCCTCGCCTCCCAGCG
AATCGGCAAGCACGGACCTCTCCTGCTCCAGGACTTTGCCCTGATCGACCTGCTCGCCCA
CTTCGACCGAGAGCGAATCCCCGAGCGAGTTGTCCACGCTAAGGGATCCGGTGCTTACGG
AGAGTTCGAGGTCACTGACGATATCACCGACCTCAACTGCGCCGATTTCTTGTCCAAGAT
CGGTAAGAAGACCAAGACCTTCACTCGATTCTCCACCGTTGGAGGAGAGAAGGGATCCGC
CGATGCTGCTCGAGACCCCCGAGGTTTCGCCACCAAGTTCTACACCGACGAGGGAAACAT
TGACTGGGTCTACAACAACACCCCCGTCTTTTTCATCAGAGACCCCTCCAAGTTCCCCGT
TTTCATCCACACTCAGAAGCGAAACCCCGAGACCAACCTCAAGGACGCCACTATGATGTG
GGACTACATTGCCAACAACCAGGAGTGTTGCCACCAGATCATGGTCCTCTTCTCCGACCG
AGGTACTCCCGCTAACTACCGACAGATGAACGGTTACTCCGGCCACACCTACAAGTGGAT
CAAGAAGGATGGCTCTTTCAACTACGTCCAGATCCACATGAAGACCGACCAGGGCATCAA
GAACCTCACCAATGACGAGGCTGTCGCTCTCTCCGGAACCAACCCCGACCACGCCCAGGA
AGACCTCTTCAACTCCATCAAGAGTGGCTCTTTCCCCTCTTGGACTTGTTACGTCCAGGT
CTGCACCCCCGAGCAGGCTGAGAAGCTCAAGTGGTCCGTCTTTGACCTCACCAAGGTCTG
GCCTCACGACCAGTTCCCTCTCAGACGATTCGGTAAGCTCACTCTTAACAAGAACGTCCA
GAACTACTTCGCTGAGACCGAGCAGGCTGCCTTCTCTCCCTCCAACACCGTCCCCGGCTG
GGAGACCTCGGCCGATCCCGTCCTGCAGTCTCGACTCTTCTCTTATCCCGATACTCAGCG
ACACCGACTCGGTACCAACTTCGCCCAGATCCCCGTCAACTGTCCCTACCATGCCCATAC
TCCTTACCACCGAGATGGTCAGATGGCTGTTAACGGCAACTCCGGCTCTCTGCCCAACTA
CCCCTCTTCTTTCGAGCCCCTGCAGTACCGACAGGACATCAACCTGCATGAGAAGCACGA
GAAGTGGGTTGGTGAGGCCGTCGCCTACCAGTGGGTTGTCGGCACCGACGGTGTTGACTT
CCAGCAGCCCGCTGAGCTCTGGAAGGTTCTTGGAAAGACCCCAGACCAGCAGGAACACCT
TGTTTACAACATCGCTGTCTCTCTGTCCGGTGCTCGACCCGAGGTCCAGGACAAGACCTT
TGGCATGTTCGACAAGGTCGATGCTCACTTCGGTAAGCTCGTCCGAGACGCTACTCTTCA
GCGATCTCCTCGATCCAAGCTTTAAACGGTTGAAGCAAAGCTTTAGTGTGTTAGCGTTGT
AGTTGAATGAAATTATAACTTATGGACAATAAAACTTGCCTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30987g_CDS-001

Protein length: 493 aa.
Product: Catalase, putative

>YALI0F30987g_CDS-001 MSGKRVPTYTTTNGNPVKDPLASQRIGKHGPLLLQDFALIDLLAHFDRERIPERVVHAKG
SGAYGEFEVTDDITDLNCADFLSKIGKKTKTFTRFSTVGGEKGSADAARDPRGFATKFYT
DEGNIDWVYNNTPVFFIRDPSKFPVFIHTQKRNPETNLKDATMMWDYIANNQECCHQIMV
LFSDRGTPANYRQMNGYSGHTYKWIKKDGSFNYVQIHMKTDQGIKNLTNDEAVALSGTNP
DHAQEDLFNSIKSGSFPSWTCYVQVCTPEQAEKLKWSVFDLTKVWPHDQFPLRRFGKLTL
NKNVQNYFAETEQAAFSPSNTVPGWETSADPVLQSRLFSYPDTQRHRLGTNFAQIPVNCP
YHAHTPYHRDGQMAVNGNSGSLPNYPSSFEPLQYRQDINLHEKHEKWVGEAVAYQWVVGT
DGVDFQQPAELWKVLGKTPDQQEHLVYNIAVSLSGARPEVQDKTFGMFDKVDAHFGKLVR
DATLQRSPRSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG