YALI0F30426g

Overview

Description similar to uniprot|P53905 Saccharomyces cerevisiae YNL147W LSM7 Lsm (Like Sm) protein
Locus type CDS
Locus tag YALI0F30426g

Location

Species Yarrowia lipolytica Positions 3799972..3800562
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 591 (nuc.)
Previous locus YALI0F30415g Next locus YALI0F30437g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30426g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30426gYALI0F30426g_mRNA-001YALI0F30426g_CDS-001

Nucleotide sequence

 

>YALI0F30426g
ATGGACCGACACGACAACCGTGGAGGAGTGAGTATAGCGGATCGAAGGCTCAGCCATCCA
TTCACACGTACTAACAACAGCGACGAGGCGGCCGAGGCGGCCATGGCAACGCTGGCCATT
ATGGAGGACACAACCAGCACCAAAATCAGCAACACCAACAGAATCAGCAGCAGCAGAACA
ACCAGAACCAGGGCCAGGGCCAAGGTCAGAACCAGGGCCAGTCCAAGAAGCTGGAATTCC
CCAAGCGAGAGCCCATTCTAGATCTGTCTCGATTCGAGAACAAGCGAGTGGTTGTCAAGG
TCACTGGCCGAAAGATCGAGGGCACCTTAAAGGGCTGGGATCAGCTCATGAACTTGATTC
TCGACGACGTCAAGGAGACCATTTACGAGGACGAGGAGAGCGAGGACTTTGCCGAGTTTG
AGGGTCAAAAGGAAGGCAAGGTGCGAGAGATCGGTCTGGCGGTCATTCGAGGCCCTAACC
TGCTTTCTATCTACCCTCTTGACGGAGGAGAGGGAGTTGAGGTGGAGCCCAAGCCCGAGG
TCACTATTTAATTGGATAGTAATAGAGTGTATATTATGTTGTGGTGGAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30426g_CDS-001

Protein length: 166 aa.
Product: Lsm (Like Sm) protein, putative

>YALI0F30426g_CDS-001 MDRHDNRGGRRGGRGGHGNAGHYGGHNQHQNQQHQQNQQQQNNQNQGQGQGQNQGQSKKL
EFPKREPILDLSRFENKRVVVKVTGRKIEGTLKGWDQLMNLILDDVKETIYEDEESEDFA
EFEGQKEGKVREIGLAVIRGPNLLSIYPLDGGEGVEVEPKPEVTI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG