YALI0F30393g

Overview

Description similar to uniprot|P25586 Saccharomyces cerevisiae YCL059c KRR1 Nucleolar protein required for rRNA synthesis and ribosomal assembly
Locus type CDS
Locus tag YALI0F30393g

Location

Species Yarrowia lipolytica Positions 3797026..3798181
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1156 (nuc.)
Previous locus YALI0F30382g Next locus YALI0F30415g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30393g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30393gYALI0F30393g_mRNA-001YALI0F30393g_CDS-001

Nucleotide sequence

 

>YALI0F30393g
ATGGTCTCTACTCATAACAAAGACAAGCCATGGGATCAGCCCCACATTGATAAGTGGGCC
GAGGATGAGTTCACCGAGAAGGACAACGCTTCCGGTCTGCCCTTTGCCGAGGAGTCTTCC
TTCGCCACACTGTTCCCCAAGTACCGAGAAGGCTACCTAAAGGAAATCTGGGATGATGTC
ACCAAAGCCCTCGACCAAAAGGGTATTGCATGTGTTCTGGATCTCGTTGAGGGTTCCATG
ACCGTCAAAACCACCCGAAAAACTTACGATCCTTACGCCATTATGAACGCTCGAGATCTC
ATCAAGCTGCTGGCCCGATCGGTGCCTTTCCCCCAGGCAGTCAAGATTCTCGAGGACGGC
ATTGCATGTGACGTTATCAAGATTGGTAACTTCACCAGCAACAAGGAGAGATTTGTCAAG
CGACGACAGCGTCTTCTTGGACCCAACGGTAACACTCTCAAGGCCCTGGAACTGCTCACA
CAGTGCTATATCCTTGTTCAGGGTAACACCGTCTCTGTCATGGGTCCCTACACACATATG
AAGACTCTGCGACGAGTGATTGAGGACTGTATGATGAACATCCACCCCATTTACCACATC
AAGGAGCTCATGATCAAGCGAGAGCTGGCCAAGCGACCCGAGCTAGCCGAGGAGGACTGG
AGCCGTTTCCTGCCCCAGTTCAAGAAGCGAAATGTTGCTCGAAAGAAGCCCAAGACCATC
AAGAACAAGGTTCGAACCGCTTTCCCTCCTGCCCAGCTGCCCCGAAAGGTGGATTTGCAG
ATCGAGTCTGGAGAGTTCTTCTTGGGTGCCGATGAGAAGCGACGACGAGCCGACGAGGAG
AAGCGACAACAGCAGGCTGCTCGAAGTGCAGAGAAGCAGGCCCAGAGAGAGCTGGCCTTC
ATTGCGCCAGACGAGGACGAAGAGAAGGCCAAGAAGGAAAAGAAGAAGGAGAAGAAGGAA
AAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAGGAGAAGAAGCGAAAGAGC
GATGACAGCGACGATGAGGGAGAGAAAAAGAAGAAGAAGAAGAAGCGATCCGTGGAGTAG
CTTGCTTGTTCAGTAAAATAGATTTGTAATGCATAACTTGGTTAAAATAAATTAACTAGC
TAGGCTAGAGAGCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30393g_CDS-001

Protein length: 360 aa.
Product: Nucleolar protein required for rRNA synthesis and ribosomal assembly, putative

>YALI0F30393g_CDS-001 MVSTHNKDKPWDQPHIDKWAEDEFTEKDNASGLPFAEESSFATLFPKYREGYLKEIWDDV
TKALDQKGIACVLDLVEGSMTVKTTRKTYDPYAIMNARDLIKLLARSVPFPQAVKILEDG
IACDVIKIGNFTSNKERFVKRRQRLLGPNGNTLKALELLTQCYILVQGNTVSVMGPYTHM
KTLRRVIEDCMMNIHPIYHIKELMIKRELAKRPELAEEDWSRFLPQFKKRNVARKKPKTI
KNKVRTAFPPAQLPRKVDLQIESGEFFLGADEKRRRADEEKRQQQAARSAEKQAQRELAF
IAPDEDEEKAKKEKKKEKKEKKEKKEKKEKKEKKEKKRKSDDSDDEGEKKKKKKKRSVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG