YALI0F29139g

Overview

Description similar to uniprot|P47016 Saccharomyces cerevisiae YJL126w NIT2 nitrilase
Locus type CDS
Locus tag YALI0F29139g

Location

Species Yarrowia lipolytica Positions 3673126..3674057
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 932 (nuc.)
Previous locus YALI0F29117r Next locus YALI0F29161g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29139g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29139gYALI0F29139g_mRNA-001YALI0F29139g_CDS-001

Nucleotide sequence

 

>YALI0F29139g
ATGACTCTCGCAGCAGTCGGCCAATTTTGTGCAACCAATTCACTTACTCACAATGCCTCT
ATTGTTGCAGGACTAGTCCATAGAGCAGCAGCCCTGGGCGCCCAGGCTCTGTTCCTCCCT
GAAGCCTCCGACTACATTTCTGGCTCGCCTAAGGAAGGGTTGAGTCTTGCACGAAATGCT
GAAAATTCGCCCATGATCGCAGCAATCAGGGAGGCTCAAAAGGAAATCAAACAGAGCGGA
ATGTCTGGAATTGAGGTCTCAGTAGGAGTTCATGAGCTGTCCTCTTCTTCTGACCGGGTC
AGAAACACCCTATTGTGGCTTGATTCCAACGGAGACATTGTCAACAGATACCAAAAAGTG
CATCTCTTCGACGTGGAGGTGCCCAACGGTCCTATTCTGCAGGAATCAAAGTCAGTAGAG
CCCGGGTCTGAACTTCCCAAGCCGTTCGAGACCCCAGTGGGAACAGTTGGACCTGCTATT
TGTTATGATATCCGGTTTCCTGAGCTGGCATTGTTGTTGAGAAAGCAAGGCGCCCAGATT
CTGCAATTTCCCTCGGCGTTTACAGTCAGAACTGGCGCCGCCCACTGGCACGTTCTTGCC
CGAGCTCGTGCTATCGATACCCAATGCTATGTCATGATGCCAGCGCTGGTTGGAAAACAC
ACAGAGGACGGCAAGCGAGAAAGCTACGGACACGCCATGATAATTGACCCCTGGGGAACT
GTTCTTGCCGAGGCCAGCGACATAGACTCTTCGGCTGCAGTTATTGTTGCCGATATCAAC
CTAGAGCAGCTGAAGAAGGTCAGGACCAATATGCCTCTGTGGGACCAGAGACGAAATGAT
GTGTATAGCTTGCTTGAGGTGAAGAAATAGGGCACATTTAAAGTGTGAACGAATGAATGA
AACCCATCTTTAGCGTAACAAACGAATAATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29139g_CDS-001

Protein length: 290 aa.
Product: Nit protein, putative

>YALI0F29139g_CDS-001 MTLAAVGQFCATNSLTHNASIVAGLVHRAAALGAQALFLPEASDYISGSPKEGLSLARNA
ENSPMIAAIREAQKEIKQSGMSGIEVSVGVHELSSSSDRVRNTLLWLDSNGDIVNRYQKV
HLFDVEVPNGPILQESKSVEPGSELPKPFETPVGTVGPAICYDIRFPELALLLRKQGAQI
LQFPSAFTVRTGAAHWHVLARARAIDTQCYVMMPALVGKHTEDGKRESYGHAMIIDPWGT
VLAEASDIDSSAAVIVADINLEQLKKVRTNMPLWDQRRNDVYSLLEVKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG