YALI0F28831g

Overview

Description similar to uniprot|P31380 Saccharomyces cerevisiae YAL019W ATP-dependent helicase FUN30
Locus type CDS
Locus tag YALI0F28831g

Location

Species Yarrowia lipolytica Positions 3661781..3664621
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2841 (nuc.)
Previous locus YALI0F28787r Next locus YALI0F28853r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28831g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28831gYALI0F28831g_mRNA-001YALI0F28831g_CDS-001

Nucleotide sequence

 

>YALI0F28831g
ATGAAAGACCAGCGAGTCCAGGTGCCTGCATCGCCCTCGCAGTCCCAAGCAAACGCGTTT
TCGGCTCTCTTTGCACCTTCTGACAAGAACTCCCTCTCCAGCTTTGCCTACAACCCTTCG
AAACCGGCATCCAATGGACAGAGACCCTCGGCAGCAACTCCCGCAGCCTTCACTGAAGAG
CAGAAGCAGCGCCTGCAACGACTGAAGCCCATGTTCAACCAGCTGCCCCTCGTCAAGCTG
AGAGAAGCAGTTGCTAACAGCACCGATTTCGACCGAGCTGTGGCATACCTTCGACGACAG
GGTAGCATTCCATCTTCTTCTATAAACTCCGCGCCAACCCATCGAAAGCCTGCTTCACTG
GTCAATCCGTTGGCTTTCCTCAACCCTTCTGTCACCACCAAGCCTGCCCCTCTGTCAACC
AAACGGGAGGTTTCCAAGTCCAAGAGTATCAGAGAGAAATGGAAAAAGGAGGAGCCTAAA
GCTGAGGACGATCTCGTTGTCATGGAAGACAAGCCTAGTGCACCCAAGAGAAGGCTGGTG
CAGGCAAAAGACCGAGCAGGATATACCCCTCAGCCCACACGGTCTCCCACTCCATTGTCT
CCTGTGTCCATTTCTCGAGACACTCCCATGGATATCGATGAAGCAGAGGCCGACGAATCT
GACGACTTCTCTGAGAAGGAAGATGTCGACCCTGGCTTCGATCTCAGAGTGTTGGAGTTC
CTCAACACCTCTTCTCAGAGAGACCTCATCGACCTGTCGTCGTGTTCCCAGAAGGTCGGT
GAGCTCATGGTCAAGAACCGACCCTACAAGAACCTGCTGCAGGCCCAAAACGTTGAGTTT
TCTGACTCGGAATCCTCATCTACTGAGAAGAAGCGGGGACGAGGAGGCCGAAAGCGAAAC
GCCGGAGAACGTATTGTTGATGCCGTCTCCGCTACTCTTCGAGGCTACGAGGCGGTGGAC
TCGTTGATCCAGAAGTGTGACGTCTTGGGTAACCAGGTGGCTGCCGATATCAAATCTTGG
GGTGTGGATATTTTTGGAGCTAAGGACGGAGAGGGTGTTGACATTACAGACATAGACGAG
GACGTTGTCAAGAAGTCGACGGTCAAGTTCCTCACCGAGAAGCCCTCTATTCTCAGTGAC
GATCTTGTTCTGAAGGACTACCAGCAGGTTGGAATCAACTGGCTGTATCTGCTCTACAAG
AAACGGCTATCTTGCATTCTGGCCGATGAGATGGGTCTCGGAAAGACCTGCCAGGTCATC
TCTTTCATGGCTCTGCTGAAGGAGCAAGGAGAACACGAGGGTCCCCATCTTGTCGTGGTG
CCTTCTTCGACACTGGAAAACTGGCTGCGAGAGTTCCAGAAATTCGCACCCTCTCTAGTT
GTCGAGCCTTACTATGGCTCCCAGAACGAACGCGCCGAGATGCGAGAGACTCTGTCCGAC
CCCGAGAATAAATACGACGTCATTGTGACCACCTACAACCTGGCTTGTGGCACCAAATTC
GATGTGTCCTTCCTAAAGTCCATCAAATTTAATTGCTGTGTTTACGATGAGGGCCATATG
CTGAAGAACTCTCAGACTGACCGATACAACAAGCTAATGCGACTCAAGGCCAATTTCCGA
CTTTTGCTGACAGGTACTCCTCTGCAGAATAACCTCCGGGAGCTTGTGTCTCTGCTTGCA
TTTATCATTCCGTCTCTATTTGATGGTTGTAAGGACGATTTGGCAGAGATATTCAAGCAC
AAGGCCACCACTAATGACGCCTCTTCACACATGCCTCTCTTGTCACAGCAGCGAGTTAAC
CGTGCAAAGACAATGATGACTCCATTCATTCTGCGACGAAAGAAGGAGCAGGTGCTGAAG
CATCTGCCTCCCAAGACTCACGAAGTCGCATACTGCCATCTTTCTCCTGATCAACAGGCC
ATTTACGACGAGCAGATGGAGCGAATGAGACAGATGCGACGAGACAGAGCTGCTGGCAAG
CCTTCCTCTCGAGTTGGAAACCCCCTCATGCTTCTACGTAAGGCGGCTCTTCATCATCTG
CTTTTCCGACGAAAGTTCGACGATGACACTCTCAAGAGCATGTCCAAGGAGATCATGAAG
GAGGAGCGGTACTACGATGCTAACCGAGACTACATCCGAGAGGATATGGAGGTCATGAGC
GACTTTGAGCTAAACAGATTAGCTCTCCAGTTCCCCAGCATCGAGAAGTATGCTCTGGAA
GAGGAGCCATGGATGGACGCTGCCAAGGTTAAGAAGTTGGCCGAGATGCTGCCTATCATG
AAGGAAAACAATGATAGAGTCCTCATTTTCTCGCAGTTCACCCAGTGCTTGGACATTCTT
GAGTCTGTTCTTAACACTCTGGGAATTGCATTTCTCCGCCTGGACGGCCAAACCCCCGTC
GAGGCCCGGCAAGACATGATCGACAAGTACTATGAGGAGACTGATATCACCGTCTTCCTG
CTCTCTACCAAAGCTGGAGGGTTTGGTATTAACTTGGCATGTGCTAACACTGTTATCATT
TTCGATCTTTCGTTCAACCCTCATGACGATAAGCAGGCCGAGGATCGAGCTCATCGAGTC
GGTCAGACTCGGGACGTCCGAGTCATTAGACTGGTGTGTAAGGGTACTGTGGAGGAGAAG
ATTCTTGAGCTCAACAATACCAAGCTGGCTCTGGACAAAAGTGTGTCTGGTGAGGGTGGT
GAAGAGGAGGCCAAGAAGAACGAGTCCAAGATCGAGGAGATGCTGATGGCGGATGACGAG
TAGCTATGTAACGGACGATAAATAAACGCATAAGATCTGAACTTAGAAACATTAATAGAT
TATTTACACTTTTTTGGGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28831g_CDS-001

Protein length: 921 aa.
Product: ATP-dependent helicase, putative

>YALI0F28831g_CDS-001 MKDQRVQVPASPSQSQANAFSALFAPSDKNSLSSFAYNPSKPASNGQRPSAATPAAFTEE
QKQRLQRLKPMFNQLPLVKLREAVANSTDFDRAVAYLRRQGSIPSSSINSAPTHRKPASL
VNPLAFLNPSVTTKPAPLSTKREVSKSKSIREKWKKEEPKAEDDLVVMEDKPSAPKRRLV
QAKDRAGYTPQPTRSPTPLSPVSISRDTPMDIDEAEADESDDFSEKEDVDPGFDLRVLEF
LNTSSQRDLIDLSSCSQKVGELMVKNRPYKNLLQAQNVEFSDSESSSTEKKRGRGGRKRN
AGERIVDAVSATLRGYEAVDSLIQKCDVLGNQVAADIKSWGVDIFGAKDGEGVDITDIDE
DVVKKSTVKFLTEKPSILSDDLVLKDYQQVGINWLYLLYKKRLSCILADEMGLGKTCQVI
SFMALLKEQGEHEGPHLVVVPSSTLENWLREFQKFAPSLVVEPYYGSQNERAEMRETLSD
PENKYDVIVTTYNLACGTKFDVSFLKSIKFNCCVYDEGHMLKNSQTDRYNKLMRLKANFR
LLLTGTPLQNNLRELVSLLAFIIPSLFDGCKDDLAEIFKHKATTNDASSHMPLLSQQRVN
RAKTMMTPFILRRKKEQVLKHLPPKTHEVAYCHLSPDQQAIYDEQMERMRQMRRDRAAGK
PSSRVGNPLMLLRKAALHHLLFRRKFDDDTLKSMSKEIMKEERYYDANRDYIREDMEVMS
DFELNRLALQFPSIEKYALEEEPWMDAAKVKKLAEMLPIMKENNDRVLIFSQFTQCLDIL
ESVLNTLGIAFLRLDGQTPVEARQDMIDKYYEETDITVFLLSTKAGGFGINLACANTVII
FDLSFNPHDDKQAEDRAHRVGQTRDVRVIRLVCKGTVEEKILELNNTKLALDKSVSGEGG
EEEAKKNESKIEEMLMADDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG