YALI0F28369g

Overview

Description similar to uniprot|P53322 Saccharomyces cerevisiae YGR260W TNA1 High affinity nicotinic acid plasma membrane permease, responsible for uptake of low levels of nicotinic acid
Locus type CDS
Locus tag YALI0F28369g

Location

Species Yarrowia lipolytica Positions 3610184..3611701
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1518 (nuc.)
Previous locus YALI0F28347g Next locus YALI0F28391g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28369g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28369gYALI0F28369g_mRNA-001YALI0F28369g_CDS-001

Nucleotide sequence

 

>YALI0F28369g
ATGGATAAAGAATCACTAAGTCACGACGAATACACCGAGTCAGGGGGGCTTGAGCATGTC
GAGTACCCTCAGGGTCAAGTCCCGCAAGAAGTTATCGACGCTGAAATTGCGCAACTTGCT
GAAAAGTACGGTATAAATCAAAGGAAACTCATGTTCAAGGTCGACATTTGTGTCATTCCT
GTCATCTGTATCCTCTACATTCTTGCCTTCCTGGATCGAGTCAACATTTCCAACGCCAAT
GTTTACGGAATGAGTAAAGATCTCAATCTCTACGGTGACCGTTTCAATACCGCTCTTGCA
ATCTTCTTTGTTCCTTATGTTGTCGCTGAAATTCCTTCGAACTGGCTCATGAAGAAGTTC
ACGCCGCACGTGTGGTTGACAGGCAGCATGCTACTGTTTGGAGTAACTCTTCTGGGTCAG
GGCTTCGCCAACAACTACTCTGCACTCCTGGCCACACGGTTTTTACTAGGACTCTTTGAA
ACAGGAATGTTTCCCGGGTCTTTCTACCTGATCTCCATGTGGTACCGACGAGAAGAGGCC
CAAAAGCGATACTCTTTCTTCTTTTCAAGCACAACCCTGGCCGGAGCCTTTGGAGGTCTC
ATTGCCGCAGGTATTCATAATCTCGATGGAGACAAAGGCCTCGCTTCGTGGCGGTGGATC
TTCATCATTGAAGGTGCCTGTACTGCTTTCATCTCTATCATCATGTTCTTCTTAATGGCC
GACTTCCCAGAGGACGCTAAATTCTTAACTGAGAATGAGCGGCAGTTCATGAAAGAGAAG
CTTGAAGTAGGAAATGCAGGTGCCAGTGAAGCCGAGAGACCCATGACTTGGAAAGACGTT
AAGAGTGTCTTTTCTGACTGGAAGGTGTGGGTCATGGGGTGGATGTACTTCGGCACCATT
GTACCTGCATACGGATACGCTTACTTCGGGACAGCTATTGTTAAGACGTTAGGATATTCT
GATGTCAAGACCCAGCTGTACTCGGTCCCTCCCTGGGTGGCGGCCTTTGGTTTCTCAATG
TTGGCAGCCATCTTCTCAGACTACCTCAGACATAGATTCTATTTTGCAGTGTTCGCCGGT
ATCGTTGCTATAGCTGGTCTGGCAGTTGTTATTGGCGTACACGACAAAATTGGAACTCGA
TATGGCTCTCTGTTCATGATCTGTGCCGGAACCTACACTGCTATGCCTCTGTTTGTGTGT
TGGACCCAAATGAACTTCTTAGGCCATCATAGGCGAGCTATCGCGTCAGGATGGCAGATT
GGGTTCGGAAACTGCGCTGGGTTCATTTCGACCTTTGTTTTCCAAGCAAACGACGCTCCA
TTTTATACGCCTGGTTGCGCCGTTTGTCTTGCCTTCGCTTGTCTCTCGCTTGTTATGCAG
TTTGTCTATGCCGCTGGAATCACCTGGGAAAACAAACGAAAGCGAACACCAGAATACATT
GAAAAGTTCAACGCTCTCTCCGAAGATGATAGGAGAATCGCAGGAGAGCTAAATCCCAGC
TTCTTCTACTACTATTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28369g_CDS-001

Protein length: 506 aa.
Product: High-affinity nicotinic acid plasma membrane permease, putative

>YALI0F28369g_CDS-001 MDKESLSHDEYTESGGLEHVEYPQGQVPQEVIDAEIAQLAEKYGINQRKLMFKVDICVIP
VICILYILAFLDRVNISNANVYGMSKDLNLYGDRFNTALAIFFVPYVVAEIPSNWLMKKF
TPHVWLTGSMLLFGVTLLGQGFANNYSALLATRFLLGLFETGMFPGSFYLISMWYRREEA
QKRYSFFFSSTTLAGAFGGLIAAGIHNLDGDKGLASWRWIFIIEGACTAFISIIMFFLMA
DFPEDAKFLTENERQFMKEKLEVGNAGASEAERPMTWKDVKSVFSDWKVWVMGWMYFGTI
VPAYGYAYFGTAIVKTLGYSDVKTQLYSVPPWVAAFGFSMLAAIFSDYLRHRFYFAVFAG
IVAIAGLAVVIGVHDKIGTRYGSLFMICAGTYTAMPLFVCWTQMNFLGHHRRAIASGWQI
GFGNCAGFISTFVFQANDAPFYTPGCAVCLAFACLSLVMQFVYAAGITWENKRKRTPEYI
EKFNALSEDDRRIAGELNPSFFYYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG