YALI0F28171g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F28171g

Location

Species Yarrowia lipolytica Positions 3584457..3585620
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1164 (nuc.)
Previous locus YALI0F28149g Next locus YALI0F28193g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28171g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28171gYALI0F28171g_mRNA-001YALI0F28171g_CDS-001

Nucleotide sequence

 

>YALI0F28171g
ATGTTACCTCCAGAAGTGTGGCTCAACATCTGCTCGTATCTCGACACCAACTCATTGCGT
GCCGTCTCACTCACCTCATGGATGCTACATCAGTGTGCGAGTACTCGATTATGGAATTCG
CCAACCAGACCCTTGCATGCTGTACGTCATGTGATCCCAGCGGGCTGGGCAGCGACGGAA
ACCACCACGGAAGTTATCGATCCAAATTCGCCTCCGCCTACTCCAGAGCCAACCAACCCT
CTGTTTTCAGACTATGACCGACGCAGTGTCGGGCTTTTGAATACCCTAAACAAAACCCCC
GACATTGAGCTGTATTGTCGTCACTTTGTTCGTCGTCTGCTGCTGGTGTACAATTCGTCA
GACCCCTGGTGCACGCTGGATAGCGAGTTTGGACATGCCATGTTGACCAATACCAATTTT
CAAACGCTCAAGGATTTGACCATATGCATTTTTGGAAACGGTTCAAGCACTGATCATCAC
CTGGTTAAACTCCAAGATGCTTTCTTTCAGTGGTGCTACAGAGAAGAAGGAAGAAACGTG
CACATCACCTGTAAAAACAGCACGTTTCTGAGCGGAGAAAGCATCGATAAGTCGGTATAT
CTGGCCTTGCATTCAGTCCAGCTAGCTCGAATCAGTAATGAGGGACTGAATCAATTGCTT
ATGAACAGCAGTAATCTCAAATACTTGAGTGTCTGTTCATCTTCGATAAGTTCTCTCAAG
ATCTGTCTACGACACATGACAGGATTGGAATATTTGGATATGGATTTGCCACTGTTTTCA
CGAATTGTAGGCATTCCAGTTGGCCTTAAGACTCTCAAAATAACAGGGATCGACGAGTTA
CCTACAAGACTACTCAAGCTGGTTGAGAACGTCCATCGACTATATCTCGAGATTGAGGGA
CTGGAAACGGAGGGTTTCTGTCAGACGTCTCTTGAGACTGAGTTTGACTTTGTTATGGAG
TCAGTTCGAGAGTTACACATTGTCGGTGGCGTTTCTGACCTGGTCGTTCTAAAACTTCTT
GATATCACTCCTCAGGCTCGAGTTTTGGTTGTTCGAGATGCTCAGCCGTTATCTGACCAA
GCGTGCTTTGAGTCACTGCATTGCAAGAAAAACCTCGAGATGATTTCATGGTCAACTCAG
GAGGAGAGTGTTATTATCAACTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28171g_CDS-001

Protein length: 388 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F28171g_CDS-001 MLPPEVWLNICSYLDTNSLRAVSLTSWMLHQCASTRLWNSPTRPLHAVRHVIPAGWAATE
TTTEVIDPNSPPPTPEPTNPLFSDYDRRSVGLLNTLNKTPDIELYCRHFVRRLLLVYNSS
DPWCTLDSEFGHAMLTNTNFQTLKDLTICIFGNGSSTDHHLVKLQDAFFQWCYREEGRNV
HITCKNSTFLSGESIDKSVYLALHSVQLARISNEGLNQLLMNSSNLKYLSVCSSSISSLK
ICLRHMTGLEYLDMDLPLFSRIVGIPVGLKTLKITGIDELPTRLLKLVENVHRLYLEIEG
LETEGFCQTSLETEFDFVMESVRELHIVGGVSDLVVLKLLDITPQARVLVVRDAQPLSDQ
ACFESLHCKKNLEMISWSTQEESVIIN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG