YALI0F28149g

Overview

Description similar to uniprot|O74397 Schizosaccharomyces pombe putative asparagine synthase
Locus type CDS
Locus tag YALI0F28149g

Location

Species Yarrowia lipolytica Positions 3581445..3583071
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1627 (nuc.)
Previous locus YALI0F28127g Next locus YALI0F28171g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28149g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28149gYALI0F28149g_mRNA-001YALI0F28149g_CDS-001

Nucleotide sequence

 

>YALI0F28149g
ATGTGTGGGATTCTGTGCTGGAAGGGAACGATAGACGACGAGCTATTGAATCGAGTCAAG
TCACGTGGTCCAACTTGCTTCGATACACGTGTCTCCAGCTCACAGGTTCATTGTTTATCG
TCAGTTCTGTCGTTGAGACCACCGCTGACACCTCAGCCAGTAGTCAAGAACGACAAAATT
GTCATGTACAATGGTGAGTTGTACAACATTGGGGAGGGATGTGACACGGTGGCTTTTTCG
GAAGCGCTCTTCAACACCCCGAGCGTCATTTCTGCATTACAAAACATCAAAGGAGAATAT
GCATTTGCGTTCGTTGACGGCAACACCATCTGGTTTGGAAGAGATTGCATAGGAAGACGG
TCCCTAGTCTACAGGATTGATGGCGAGAACTTTGTGATCTCGTCTGTGACCGATCATGTG
ATGGATACCGAAGAGCAAGGCTGGATCCAATGTGTGGGGGGAGTAGTCTACGAGCTTGAT
GTTGTGACAGTTAGCATAAGTGAGCATCTATGGGGATACAAGGACGATGAGACTAATCCG
AACTTGATATATCCATACAGGGAAGTGTCGAATGATGTCATTGAGCTGGAAAATCACGTG
ATCTCAGAGTATGCCACTCAGTTCAAACAGCTTTTGGCAGATGCATTGTCGGTCAGAACG
GTGGGATATGAGCAAATATCAATTCTCTTCTCAGGAGGTATTGACTGTGCATTACTCGCA
CGGTTGGCGGACATTAATCTGCCTCCGTCAGTGTCAATTCAGCTCGTTAACGTTGCTTTC
CAAAATCCTCGAGTTGGAGAAGAGTACGAGACTCCAGATCGGGTCCTAGGTAGAAACACC
TTTGAAGAATTGAAGGCACTGAGTCAATATGGTCGGATGATCTTCTCAGAAGTCAATGTT
CCTTACGAGGAGACACTCTCTCATCGAGAGACTGTTCAGTCGTTGATGTACCCCTCTACG
TCAGTTATGGATCTCAGTATTGCTGTCGCCTTCTACTTTGCCAGCAAAGCATGCTCCAGC
AACGTTGTAATTTCAGGACTAGGAGCAGATGAGTTGTTTGGAGGATACTCGAGAATCGTG
CAGAGTCTTACACGTGGTTACGATGCCGTGGCAGAGTCTCTACAGGTCGAGTTTTCTCGT
TTGCATGTCCGAAACCTCGGCCGAGACGACAGAGTCATTTGTCACCATGGAAAGGAGGCC
CGATACCCGTTTCTGGACGAAGACGTGGTTGCCTGGGCAACGGCCTGCCCGGTGAACCTC
AAGCTGAGCGGATCACGTGATGAAGACACCAAGTTTCTACTCCGAGAGGTGGCTCGGAGT
GTGGGGCTTGATTCGGTAACTTTTCAGAAAAAGCGCGCCATTCAATTTGGAGCCCGAAGT
GCCAAGATGGAGATTGGAAGCGGCAAAGTGAAGGGTCATGAGGTGTTTAAGTAGAGCAGA
CTTTTTACTAATGGGTTGTGGTTACAGTACATGCTCGAACAGAGATCTCTTTAACGGCTT
GTCCTTGTTCCATTCCTGACCTACTACTTTTATTCGTGTTGATCGACCCGGCTCTTCCAT
GCAGTTTTGGTGCAAGAACGTTCTGAAGAATGTACATACACCTATAGCTAACAGCACATA
CATTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28149g_CDS-001

Protein length: 478 aa.
Product: Asparagine synthase, putative

>YALI0F28149g_CDS-001 MCGILCWKGTIDDELLNRVKSRGPTCFDTRVSSSQVHCLSSVLSLRPPLTPQPVVKNDKI
VMYNGELYNIGEGCDTVAFSEALFNTPSVISALQNIKGEYAFAFVDGNTIWFGRDCIGRR
SLVYRIDGENFVISSVTDHVMDTEEQGWIQCVGGVVYELDVVTVSISEHLWGYKDDETNP
NLIYPYREVSNDVIELENHVISEYATQFKQLLADALSVRTVGYEQISILFSGGIDCALLA
RLADINLPPSVSIQLVNVAFQNPRVGEEYETPDRVLGRNTFEELKALSQYGRMIFSEVNV
PYEETLSHRETVQSLMYPSTSVMDLSIAVAFYFASKACSSNVVISGLGADELFGGYSRIV
QSLTRGYDAVAESLQVEFSRLHVRNLGRDDRVICHHGKEARYPFLDEDVVAWATACPVNL
KLSGSRDEDTKFLLREVARSVGLDSVTFQKKRAIQFGARSAKMEIGSGKVKGHEVFK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG