YALI0F27907g

Overview

Description similar to uniprot|P43601 Saccharomyces cerevisiae YFR021w unknown function
Locus type CDS
Locus tag YALI0F27907g

Location

Species Yarrowia lipolytica Positions 3557197..3558509
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1313 (nuc.)
Previous locus YALI0F27885g Next locus YALI0F27929g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27907g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27907gYALI0F27907g_mRNA-001YALI0F27907g_CDS-001

Nucleotide sequence

 

>YALI0F27907g
ATGTCCGACTCGATCAACTTTGTGTCCTTCAACCAGGACTACAGTTGTGTGTCTGTCGGC
ACCCCTCAGGGCTACAAAATCTACAACTGCGACCCGTTCGGCAAATGCTTCTCCAAGGCC
GACGGAGGCATGGGCATTGTGGAGATGCTCTTTTGTACCTCGTTAATAGCCGTTGTGGGG
ATGGGCGACCAACCACAAAACTCTCCTCGCCGACTCAAAATCGTCAACACAAAACGACAG
TCGACCATCTGCGAGCTCACGTTTCCCACTGCTGTTCTAGGGGTACGTCTCAACCGACAA
CGTCTGGTGGTGCTCCTGCAGGATCAAATCTACATCTACGACATTAGCAACATGAAACTG
GTGCACACAATCGAGACAAGCCCCAACCCTGGAGCCGTCTGCGCCCTGTCAGCTTCCTCT
TCCGACAACAACAACTACCTGGTGTACCCTTTCCCAGCTCCTTCGTCCACTGCATTCAAT
CCAGGCGAAAACAATATCAACGACTCATCTCCCAATAGAAAGGGTGATGTAACCATCTTC
GATTGCAACTCTCTTCAGCCCGTGAACGTCGTCGAGGCACACAAGACTCCCTTGGCATGC
CTGTCATTGAACTCTGACGGTACACTACTGGCTACAGCCTCCGACAAGGGTACAATCATC
CGAGTGTTCAGCGTTCCCAAGGCCCAGAAGCTCTACGAGTTCCGTCGAGGCACCTACCCG
GCCCAGATCTTCTCTATCAACTTTAATCTGGCCTCCAATCTCATGGCTGTTTCCTCTGCC
ACAGAAACAGTCCATATCTTCCAGCTCGAAGCGGGCGTGTCCAGCACTCCCGAGGTGCCC
CAGGACACGGAGCTGGCTATTCCCACACGTACCCCACAACAGAAGGGTATGGCTTCGGTG
TTTCGGAAGTCGTCTCGAAGCCTTGGAAAGGGTCTGGCAGGAGCTGTTGGTTCATACCTG
CCCCAGACCTTCACTGGAATGTGGGAGCCGCTTCGAGATTTTGCATTCATCAAACAAACG
TCGCTCCCCGGAACCCGTTCGGTGGTCAGTGTCACTTCCACCAACCCTCCTCAGGTGCTG
GTGGTGACTCTGGAAGGTTATTTTTACCAGTACACTCTCGATCTGGAGAAGGGCGGCGAG
TGTGACCTGATTCGACAGTACTCGCTTCTGGACAATGTCGAGGGGTCGCTGTACGGCCCT
TAGAGGTCAAACTGAGCAACTGGAGCATTGGATGGTGGCGTATCGACGTAAACACCCGGC
AGCATTTTGTTGGCTATATAACTGACTTTACTAATGAATTATGTATCAAAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27907g_CDS-001

Protein length: 401 aa.
Product: Phosphoinositide binding protein, putative

>YALI0F27907g_CDS-001 MSDSINFVSFNQDYSCVSVGTPQGYKIYNCDPFGKCFSKADGGMGIVEMLFCTSLIAVVG
MGDQPQNSPRRLKIVNTKRQSTICELTFPTAVLGVRLNRQRLVVLLQDQIYIYDISNMKL
VHTIETSPNPGAVCALSASSSDNNNYLVYPFPAPSSTAFNPGENNINDSSPNRKGDVTIF
DCNSLQPVNVVEAHKTPLACLSLNSDGTLLATASDKGTIIRVFSVPKAQKLYEFRRGTYP
AQIFSINFNLASNLMAVSSATETVHIFQLEAGVSSTPEVPQDTELAIPTRTPQQKGMASV
FRKSSRSLGKGLAGAVGSYLPQTFTGMWEPLRDFAFIKQTSLPGTRSVVSVTSTNPPQVL
VVTLEGYFYQYTLDLEKGGECDLIRQYSLLDNVEGSLYGP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG