YALI0F27577g

Overview

Description weakly similar to uniprot|F9X9K1 Zymoseptoria tritici hypothetical protein MYCGRDRAFT_85675
Locus type CDS
Locus tag YALI0F27577g

Location

Species Yarrowia lipolytica Positions 3497136..3498587
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1452 (nuc.)
Previous locus YALI0F27555g Next locus YALI0F27599g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27577g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27577gYALI0F27577g_mRNA-001YALI0F27577g_CDS-001

Nucleotide sequence

 

>YALI0F27577g
ATGATCGGGCATCTCCACACATATGACATCACATACACCATCTCTCTCTTGGAAGTACAC
AACCCAACACAATACCATTTCAGTCCACCAAAAATGTCGTCGAAAACAGCCTATGAAGAT
TTTCAGAGTGAGCCCCAGGATCCCCTGCTCTGTGACGCGCTAAAAATGTCACTCACCACG
GCTCAGGCCTGGACTCAAATCGGTGGCATTTCGGCTGCAGATGATATCGCCACACATGTT
CTCGATGGCTCTCTGGACGAGGCGAGTACTCTCAATCTGGCCGCAACGGTGTCCAATGGA
TACTTTTTGCTGCGACAATACATCACATCAGCTACCAAAGCCCCTAAATTGGTTAACTGG
GCCACAACAACATATCCCGACACTGACGAACGAGGAAAGATGATATGCCGACGAATCCTC
TTTCTGTGTTCGTCGGAGCGTATTGAGGGCTTGAATGTCGCCACCCTTGCCAAAGGCCTG
GAACTGGGACTCACAGATCTGCAGGATCAGCTGGAGAAGAAGAAACAGGACAAGAACCTG
CTTCTACAGCATCTGAGAGAAATCCTGTCGGGATTTGTCTGTCTCATTACAGTCTACAAG
ACAGTTCGAGAGGACCAGGAGAAACAGACAAGTGAAACTCTGAAACAGATTGTGCCTCAT
GTGCTCACTCTAGCCACTCAAAACCCAGAGCTTCTGTACCCCTGTATCCCCATTATCAGT
TGTCGTCCTGATGTCGCAGTGGAGTCGCAGAAGCTGTTTGTGACGTATCTGGAGACGTTG
GAGGTGCAACTCAAGCAGGTTTTGTGTGCCACCTATCCAGACATCACTGCCTTGGCTCAG
CTACTCTATGGACTTGCTCCTCTGGTCCCTATCGTCACAACTGTCGATGGCGCAGAACCA
GCCAGAGAGATCCTCTGTAGAGTTTTCTTGCCATCTGACGAAGACCGAAAGGAGGCCATT
GGAAAGACCAAGAGTATTCCCAGCCGACTTCTCAAGGTGACAGAGGAGCCCGAGTTCCAG
GACTGCAAGTTTCTGGTCAACGAGGCCCAATGGGTGCTGTGTGAAGAGAACAAGGACAAG
TTCACAGATGCCATTGGCTTCGGCTATGCTGCGGGTTACCTTACTGGATTCGCCGCCTCT
TCTGCCTCCACTGGACCTGCATCTAACTCTGGTTTTGGCTATGATAAAGTCACAGGACAG
AAGCTGACACCTGAACTGCAAGAGCTGAAGAAGCTACAGGAACAAATCAGCGCAATGAGC
CCTGAAGAGAAGGAACGGGAGGCCGAAAAACTCATGTACCTTTTTAACCGAATGAAGGAG
TTGGGAATTGTCAACTTTGATCATCCCATGCGAGCTGCCCAGGAGAGTGGTCGTTTCGAG
GAGCTGGATTAATCAAGTTGTCTGTGAACATAATATATTACCTATAACAATGACTAATTC
TACTGTGCCCAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27577g_CDS-001

Protein length: 464 aa.
Product: Conserved hypothetical protein

>YALI0F27577g_CDS-001 MIGHLHTYDITYTISLLEVHNPTQYHFSPPKMSSKTAYEDFQSEPQDPLLCDALKMSLTT
AQAWTQIGGISAADDIATHVLDGSLDEASTLNLAATVSNGYFLLRQYITSATKAPKLVNW
ATTTYPDTDERGKMICRRILFLCSSERIEGLNVATLAKGLELGLTDLQDQLEKKKQDKNL
LLQHLREILSGFVCLITVYKTVREDQEKQTSETLKQIVPHVLTLATQNPELLYPCIPIIS
CRPDVAVESQKLFVTYLETLEVQLKQVLCATYPDITALAQLLYGLAPLVPIVTTVDGAEP
AREILCRVFLPSDEDRKEAIGKTKSIPSRLLKVTEEPEFQDCKFLVNEAQWVLCEENKDK
FTDAIGFGYAAGYLTGFAASSASTGPASNSGFGYDKVTGQKLTPELQELKKLQEQISAMS
PEEKEREAEKLMYLFNRMKELGIVNFDHPMRAAQESGRFEELD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG