YALI0F27379g

Overview

Description weakly similar to uniprot|O13930 Schizosaccharomyces pombe hypothetical serine-rich protein
Locus type CDS
Locus tag YALI0F27379g

Location

Species Yarrowia lipolytica Positions 3475878..3478136
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2259 (nuc.)
Previous locus YALI0F27357g Next locus YALI0F27401g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27379g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27379gYALI0F27379g_mRNA-001YALI0F27379g_CDS-001

Nucleotide sequence

 

>YALI0F27379g
ATGGCGCAAAAAAGCAACAAAACAGAGGACGCTCCCATGAGTGTTGAAACACAGACACAG
ACGCAGCAGCATGCTCACGTCGGCCCCGCCCAGATGGCATCGGCCTCCGCAGCTTCCTCT
GTACACATCAAGGAGCTCACCCAGGAGGTGTCTTCCTTGTCCACCCGGCTTCTCCAAGCG
ATGGAAACACAGTCTGAGCTGGAGGAGGAGCTTGGACGAGAGAAGCGTGACAAGGATCGA
GCCAACGTGGAGAACAAGGAGCTGAAAACTGAGGTCCAGAACCTGCGGGAGGAGATGCAG
GAGCTTTCAGCGGAGCTGTTTGATGAGGCCAACAACATGGTGTCTGACGCTCGAAGAGAC
GCCGCCAAGGAAGTGGCAGAAACCAAGAAGCGCAACGACCAGCTCAAGGTGCAGCTTGAG
GAGCGAGACAACTTGCTCGAGAGTCTACAGGCCCAGCTGAGTGCACTAAAGCAGGCCATG
CAGGAGCGAGACGAGGAGGAAGATCGACTACAGAACCTGGGCGAGGAGAGCGATGAGGAG
GAGCAGGAGGACCGTGTTACACAAAGAGACAGCATTCACGGAACCACGAATGACGGATCA
GACGATGGGTTTGAGTCTGCCGCAGAGGGTGATTCTGACAACAAACAACACTCGTCGTTA
CCCGGATCAGCAAACGCTTCTTCCACCAACGTTTCTGGACCCCCACCAGTTGCTACTCGA
CCTCGTCTCTCCCGTGCTCCTTCATCTCGAAAGCGAATGACTGCCGCACCTACCACAGCA
GAACTCAACTCTCCCTCCAGGCCTCATCTTCGACAGGATCTGGCCTCTTTTAGAGACTTC
ATTGCTCTGGTTCGACAGGCTGCTAAGCAGCGAGAAGCTTCTCTTGAGTCTGCCACTAAC
TCGGCCTCAACTCATGCGGCCGGTCCCACGTCGTCTTCCACTTCTTCTACGGACGTCGCT
GCCACTTCCTCCAACGATGACGTACCCCATACTCCACCCACACACCAGGGCCCCTTCAAG
CACGACGACCAGTCCCCGCTCACATCCATCTACTCGTCGTACATGTCACCACAATCTCAC
AAAGAGCCCCCACAACTGCAACTCAAGGATACGCGGTTTTTCAAAAAATTCATTTCCGAA
GACTTTGAGCCCACTCTGCGACTTGACCTGGCACCCGGTCTATCGTGGCTTGCCCGACGA
GCAGTCCAGATGGCTATTTTGGAAGGAACTATTGTCATCGACCCAATCGCAGCTGTCAAC
GAGCTGTACGGTGTCAACATGATGACCAACATGTGGCTGAATGGAGGATTCAGCGAGTCT
GCTGGAGCTCCCCGAGATGCCAACGGAGAGCTTCTGAAGGACGCACACTCCGGAGACGCT
ACCACCTCTAAGGACGTGGTTGCTCCCGATCACCCCCCCAAGCAACGACCTGTCAGTGCA
TTGGTCAGCTTTGCTCGTGATGCCAAGCTGATGAAACCCGAAAAGGTGAACGAGGAGGAT
AATCACATCACGCCTCCCATGTCGCGAGAAGAAGCACGGGCTCAGACTGCCCGAGATCTG
GAATCAAGGGCCTCCCACGATTCGTCCCGACACTCGCATGACTCTCGAACGTCTTCCTCC
AACAACGTGTCGCCTCCCATGGCGACTATTTCGGCCTGTGCTCTCTGTGGCGAGTCTCGA
AACCACTCTCTGGTCTATGCCCGTCTTCACTATCTGCGAACAGCTCATGCCGCCGCTGGA
GAGACTGGCGAGTCAGGTGAAGCTGGTCCCAACACCTCTGCCTTGACTGCAGGCAAGGGC
TACCCTCTGTGTGGTTACTGTCTGGTGCGAGTGCGAGCTGTTTGTGACTACCTGACTTTT
TTGCGGTCTGTCAAGGACGGTGTTTGGAAGGTGGATGGCGTTGCCTCTGAAAACAAGGTG
TGGGCCGAGTGTATCCGACTCAAGGAGCGAATGTTCTGGGCTCGAGTCGGTGGAGGTTTC
CTGTAGTGTGTGTGAGAGAGATAGGGAGAGAGAGGGAGAGAGAGGGAGAGAGAGGGAGAG
AGAGAGGATTCCAGGAGCATAACATCAGGAGTTAGGTGCGTCAGGAGCATTTTAATGATA
AATGGCCCGTCCGAAGAGCACATGCAAGAAAGTGGTGTGCAACGAGAACATGGCCGGTAA
TGAGTTCACGTCTGGAGTATACTGTACAAGTATGCATGTACAGTGTCAGTACAGTAATAC
AATGATTAAATGATAGAAGCAATGAAGTGGAACACGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27379g_CDS-001

Protein length: 662 aa.
Product: Conserved hypothetical protein

>YALI0F27379g_CDS-001 MAQKSNKTEDAPMSVETQTQTQQHAHVGPAQMASASAASSVHIKELTQEVSSLSTRLLQA
METQSELEEELGREKRDKDRANVENKELKTEVQNLREEMQELSAELFDEANNMVSDARRD
AAKEVAETKKRNDQLKVQLEERDNLLESLQAQLSALKQAMQERDEEEDRLQNLGEESDEE
EQEDRVTQRDSIHGTTNDGSDDGFESAAEGDSDNKQHSSLPGSANASSTNVSGPPPVATR
PRLSRAPSSRKRMTAAPTTAELNSPSRPHLRQDLASFRDFIALVRQAAKQREASLESATN
SASTHAAGPTSSSTSSTDVAATSSNDDVPHTPPTHQGPFKHDDQSPLTSIYSSYMSPQSH
KEPPQLQLKDTRFFKKFISEDFEPTLRLDLAPGLSWLARRAVQMAILEGTIVIDPIAAVN
ELYGVNMMTNMWLNGGFSESAGAPRDANGELLKDAHSGDATTSKDVVAPDHPPKQRPVSA
LVSFARDAKLMKPEKVNEEDNHITPPMSREEARAQTARDLESRASHDSSRHSHDSRTSSS
NNVSPPMATISACALCGESRNHSLVYARLHYLRTAHAAAGETGESGEAGPNTSALTAGKG
YPLCGYCLVRVRAVCDYLTFLRSVKDGVWKVDGVASENKVWAECIRLKERMFWARVGGGF
L*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG