YALI0F27313g

Overview

Description weakly similar to uniprot|O13850 Schizosaccharomyces pombe hypothetical protein
Locus type CDS
Locus tag YALI0F27313g

Location

Species Yarrowia lipolytica Positions 3468323..3469177
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 855 (nuc.)
Previous locus YALI0F27291g Next locus YALI0F27324g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27313g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27313gYALI0F27313g_mRNA-001YALI0F27313g_CDS-001

Nucleotide sequence

 

>YALI0F27313g
ATGTTTCGAACCGTGCGAAGCTGTGCTGTGGCCCTGCCCACCCGAGCATCCACCCTGCGA
GCCTACCATTCTATCAACCTCATCAACACAAAGCCCACCGAGGACTACAATCCCAAGACC
AAAAAGTTGCTAGACGCAGCCATGGATCTGGTCCCCAGTCTTGGATTCACTGACCAGGCC
CTTACACTCGCCTCTAGACGTCTTGGTTACACAGATACAACTCCCCTGGTGCTTCCCGAG
GGTCCTCTAGATCTAATTGTGTACCATCTTCGACGAGAACGAGAGAAGCTGGCCGTCGCC
TCTGAGACTGCTCCTGCCGACCCTCCTGCCGCCCCCACGACCCCGGATTTCCGAACCAAG
GACCAGCGACTTGACGATGCCTGCCACGAACTCATTGTGCAGCGTCTCAAGGGCAACATC
CCCGTCATTGAGCACCTCGACAACGCCTTGGCCCTTATGGTCCAGCCTCAGAACATGGCC
GAGTCTCTCAGCGAGCTGGGAGCTCTCAGTGACGAGATTGTTCACCAGGCTGGCCACCGA
TCGTCCGACTTTGACTGGTACACGCGACGAGCATCCATCTCTGCTGTCTACGCTGCGTCT
GAGGTATACATGTGCCAGGACAAGAGCAAGAACTTTGAGGACACCTGGAAGTTTGTCAAG
AGCAGTCTGGAGGCCCGACGGGGGCTGCAGGAGGGCGTTGGAAACGTGGGCCAGTGGGTC
AGCTTCCAGGGCATTGCCTCCGTCATGGTCATTCGATCCCTGATGACTCGGTTGTAAGGA
ATCACATCCTACACCCCGTTTTCTGATTGAAACCACATAGCTATAGATGAATTACGAGTA
TATGAGTTGCTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27313g_CDS-001

Protein length: 259 aa.
Product: Conserved hypothetical protein

>YALI0F27313g_CDS-001 MFRTVRSCAVALPTRASTLRAYHSINLINTKPTEDYNPKTKKLLDAAMDLVPSLGFTDQA
LTLASRRLGYTDTTPLVLPEGPLDLIVYHLRREREKLAVASETAPADPPAAPTTPDFRTK
DQRLDDACHELIVQRLKGNIPVIEHLDNALALMVQPQNMAESLSELGALSDEIVHQAGHR
SSDFDWYTRRASISAVYAASEVYMCQDKSKNFEDTWKFVKSSLEARRGLQEGVGNVGQWV
SFQGIASVMVIRSLMTRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG