YALI0F27291g

Overview

Description weakly similar to uniprot|Q03944 Saccharomyces cerevisiae YDR200C (ohnolog of YLR238W) VPS64 protein required for cytoplasm to vacuole targeting of proteins
Locus type CDS
Locus tag YALI0F27291g

Location

Species Yarrowia lipolytica Positions 3465007..3466999
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1993 (nuc.)
Previous locus YALI0F27269g Next locus YALI0F27313g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27291g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27291gYALI0F27291g_mRNA-001YALI0F27291g_CDS-001

Nucleotide sequence

 

>YALI0F27291g
ATGCGTGAAAACGGCTCTTTACGATCCGCACGTTCAGTGTCGTCTCTCAACTCGGTGGAC
AGCTCGGCGACTGTCCAGCCATCAGACCGAGACGTGCCGGTCAACGCGCCCTCCGTCTAT
CCCCGCACTGCGTCTGCCACGGCCTCTACCACATCCACAAGTGCCGGGGCCAGCTCTGTG
GGCGCCAGTACCTCCAGTGGCAGCATTTCCAGCATCCCCAACTCCTCATCCTCCTCGTCT
ATTGCTCCTAAGCGAGTGAATGGCGGTGGTGCGCCCACAACCGCAGCCCCAACTGCAGTC
TCAGGCGCTACAGGTGTCTCGAGTGTTACACAGGGACCTACGGGCACACCTGGCAGATCT
GTTTCTACCGCCATCCAAGCAGCCACCACTCCAGCTCCATCAACCTCTGCACCCCAGATC
TCATCAGCAGCTGCATCAAACAATACCAACAACAACAACAATAACAATAACGCCACTACG
GCTACAAATGCTCCTGCGGATCCCCCCAGACGTCGAACTCGAAACACGTCTGCATCTTCC
GCCAGCGAGCTGGGAATCACGCCCGCGCGTACCCAATATTGTGTTGTTATCGTACTGTCT
CCCAGAAACAACACGTTTGACCGCAAGTCTCTAGTACTTCCATTCTATCCCGAAGTGCTC
AAACTAGGCCGTCAGACGTCTCAAAAGACTCTACCCTCACCCGACAATGGCTACTTCGAC
TCGAGGGTGCTGTCACGACAACACGCGGAGATCTGGGCCGACAAACTGACACGAAAAGTA
TGGATGAAGGACGCAAAGTCCTCCAACGGAACATATATCAATGGCGAGCGTCTGAGCCAA
GATGGACGAGAATCGGAACCCCACGAGCTCAAGCGAAACGATCTGCTCGAGCTCGGAATC
GACATCGCCAATAACGATGGCTCGGCTCTTCTACACCGTAAAATCAGCGCAGTGGTGGAA
CGAATCAGTGTCATGAGTCTGCAGTCAGGAGACTCGTCTCTCACGCAGGTCAATGTCCTG
AGCAACGGCAGTGGAGTGGTCTCTCAAAACAACGGTGGGAACAACCAGCAACTAACGCAA
AACCAGACACTTACCTCACAAGGCCAGCAGACACTGATTGGTCCTCCTTCTCGAGCACGT
CCCAAGAAGGCCGAGGCTCTTGATGTTGCACTTTTCGGAGATGTGGACACTTCTCTGGAG
GATCTTGCTCTGGGCCACTCTCGCAACTCGGTCGGGGGTCTCTTCATGAAGTCAGGCATC
TCTTCGTCGTCCAACATTGAGAATGCAGTAAAAACTCTCGCTGAACAAATCCACAGCACG
CGTGTGGAGACAGCCAAGCTGGAAAGTGTGCGCAAGATGCTATCGCAGATCCAAAGCCAG
CAGAAGAAACACAAAAGTCTTAAGGACGAACGAAACGAGCAGATGAAAGAGTATGCTAGT
GTGGAGCTGCAGCAGCGAGTGCGGGAGCTCGAAGCTGAGGTGAAACAGGGTAAAGAAAAG
ATTCGCGACTTGGAAACAGAACTCGAGCGAACACGAGCAGTTGGAACTGCCTCCGGAGCT
GCCGGCGTGGCTACAGCAGCAGGAGTTGTTGGAGCTGTTTCCAACCCTTCTTCTGACAGT
GAGGTGTTGACACAGCTTAAAAGAGAAGTCACTGATACAAAGGCTGAAAACTCCCGGCTG
CGAGAACGAGCGGAGGTTGCTGAGCAACAAGCAGAGTCTTCCACCATTCAGCTGTCCCTG
ATTGAGCAGCAGCTGGACGAGTACAAGCAGCAGCTGGACCACCACAAGCAGCAACTGGAT
GAGCATAAGGACAACAAGCCACACAAGAAGCAGATGTTTGCGTCATTAACAGTGTTGGTG
CTGGGAATTGGGTTTGTCGTGGCCAACAAGTTTTTCCGAGAACACATTGATCGGTGGGTA
GCTGGAATCACCGGCGTAGGATCTGCAGCTGTATAGTATGAAATACGATAATGATGATAT
TAATACGGTATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27291g_CDS-001

Protein length: 652 aa.
Product: Conserved hypothetical protein

>YALI0F27291g_CDS-001 MRENGSLRSARSVSSLNSVDSSATVQPSDRDVPVNAPSVYPRTASATASTTSTSAGASSV
GASTSSGSISSIPNSSSSSSIAPKRVNGGGAPTTAAPTAVSGATGVSSVTQGPTGTPGRS
VSTAIQAATTPAPSTSAPQISSAAASNNTNNNNNNNNATTATNAPADPPRRRTRNTSASS
ASELGITPARTQYCVVIVLSPRNNTFDRKSLVLPFYPEVLKLGRQTSQKTLPSPDNGYFD
SRVLSRQHAEIWADKLTRKVWMKDAKSSNGTYINGERLSQDGRESEPHELKRNDLLELGI
DIANNDGSALLHRKISAVVERISVMSLQSGDSSLTQVNVLSNGSGVVSQNNGGNNQQLTQ
NQTLTSQGQQTLIGPPSRARPKKAEALDVALFGDVDTSLEDLALGHSRNSVGGLFMKSGI
SSSSNIENAVKTLAEQIHSTRVETAKLESVRKMLSQIQSQQKKHKSLKDERNEQMKEYAS
VELQQRVRELEAEVKQGKEKIRDLETELERTRAVGTASGAAGVATAAGVVGAVSNPSSDS
EVLTQLKREVTDTKAENSRLRERAEVAEQQAESSTIQLSLIEQQLDEYKQQLDHHKQQLD
EHKDNKPHKKQMFASLTVLVLGIGFVVANKFFREHIDRWVAGITGVGSAAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG