YALI0F27071g

Overview

Description similar to uniprot|P07267 Saccharomyces cerevisiae YPL154c PEP4 aspartyl protease
Locus type CDS
Locus tag YALI0F27071g

Location

Species Yarrowia lipolytica Positions 3443734..3445143
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1410 (nuc.)
Previous locus YALI0F27049g Next locus YALI0F27093g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27071g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27071gYALI0F27071g_mRNA-001YALI0F27071g_CDS-001

Nucleotide sequence

 

>YALI0F27071g
ATGAAATTCACAGCTGCTGTTTCCGTTTTGGCCGCAGCCGGCAGCGTTTCTGCTGCCGTC
TCCAAGTGAGTATCACATCACCTTTGTGGAGGTCTTCTGTCTGGTTCTTTAACGCCGAAC
CCCACATGGGTGGCGAAAGTTGAGATGACAGACCAAAACGATGAGATGCACAAAACCGGG
AAAAACAGTCGAGGAATGAGCATTGAAAAGAACGCAAACTAACCGCAGGGTCTCTATCAA
CAAGATGTCGACTGCCGAGCTCCTCGGAAAGGAGAACGGTTTCGAGGACCATCTCCGAAT
GATGGGCCAGAAGTACATGGGCAAGTTCCAGAAGCTGGGCGAGTTCAACGAGCTGGCCAG
CATCCAGGACGTCTCAAACTCTCCCCTCACGAACTACCTCAACGCTCAGTACTACACTGA
GATTGAGATCGGAACCCCTCCCCAGAAGTTCAACGTCATTCTCGATACTGGCTCTTCTAA
CCTGTGGGTCCCCTCCGTCCAGTGCAACTCTATTGCCTGCTACCTGCACCAGAAGTACGA
CTCCGCCGCTTCGTCCTCTTACAAGGCTAACGGTACTGCTTTCGAGATCCAGTACGGTTC
CGGCTCCATGGAGGGCTTTGTGTCCCAGGACACCCTTAAGCTCGGCTCTCTTGTTCTCCC
CGAGCAGGACTTTGCTGAGGCCACCTCCGAGCCCGGTCTCGCCTTTGCCTTCGGAAAATT
CGATGGTATCCTTGGTCTCGCTTACGACACCATCTCTGTCAACAAGATTGTTCCTCCTGT
TTACAACGCTGTGAACCGAGGTCTCCTTGACAAGAACCAGTTCTCCTTCTTCCTCGGTGA
CACCAACAAGGGCACTGACGGAGGTGTCGCTACCTTTGGTGGAGTTGATGAGGACTACTT
TGAGGGCAAGATCACTTGGCTCCCTGTCCGACGAAAGGCGTACTGGGAGGTTGAGTTCAA
CTCTATTACTCTTGGTGACCAGACTGCTGAGCTTGTCAACACCGGTGCTGCCATCGATAC
TGGAACTTCCCTCCTTGCCCTTCCTTCTGGCCTTGCCGAGGTTCTCAACTCCGAGATTGG
CGCTACCAAGGGTTGGTCCGGACAATACACCGTTGAGTGTGACAAGGTCGACTCTCTGCC
CGATCTGACTTTCAACTTCGCTGGATACAACTTCACCATTGGTCCTCGAGACTACACCCT
GGAGCTCTCCGGATCTTGCGTCTCTGCCTTCACTGGTTTTGACATCCCTGCTCCCGTTGG
CCCTATTGCCATCATCGGTGATGCCTTCCTGCGACGATACTACTCTGTCTACGATCTTGA
CCACGATGCCGTTGGTCTGGCCAAGGCTAAGTAAGTGCCGTAGCATTCTATATAAGCATC
TAATGGATTATAACTTCGTATCTTAATCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27071g_CDS-001

Protein length: 397 aa.
Product: Vacuolar aspartyl protease (proteinase A), putative

>YALI0F27071g_CDS-001 MKFTAAVSVLAAAGSVSAAVSKVSINKMSTAELLGKENGFEDHLRMMGQKYMGKFQKLGE
FNELASIQDVSNSPLTNYLNAQYYTEIEIGTPPQKFNVILDTGSSNLWVPSVQCNSIACY
LHQKYDSAASSSYKANGTAFEIQYGSGSMEGFVSQDTLKLGSLVLPEQDFAEATSEPGLA
FAFGKFDGILGLAYDTISVNKIVPPVYNAVNRGLLDKNQFSFFLGDTNKGTDGGVATFGG
VDEDYFEGKITWLPVRRKAYWEVEFNSITLGDQTAELVNTGAAIDTGTSLLALPSGLAEV
LNSEIGATKGWSGQYTVECDKVDSLPDLTFNFAGYNFTIGPRDYTLELSGSCVSAFTGFD
IPAPVGPIAIIGDAFLRRYYSVYDLDHDAVGLAKAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG