YALI0F27005g

Overview

Description similar to uniprot|C5M5T2 Candida tropicalis conserved hypothetical protein
Locus type CDS
Locus tag YALI0F27005g

Location

Species Yarrowia lipolytica Positions 3436030..3437589
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1560 (nuc.)
Previous locus YALI0F26983g Next locus YALI0F27027g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27005g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27005gYALI0F27005g_mRNA-001YALI0F27005g_CDS-001

Nucleotide sequence

 

>YALI0F27005g
ATGACTGAGCTCTACTCTCACTCTCTCATTGTCGGCGCAGGCTTCTCTGGCGTGGCCACT
GCAATCAAGCACATCAAGGAGTGGAACAACCCCGACTTCCACATCTACGACAGAGACTCG
GCCTTTGGAGGCACCTGGAAGGCCAATACCTATCCTGGCTGTGCCTCGGACGTTCCTGCC
ATCTTTTATTGCCTTACCTCAGACCCCAAGATTGATTGGAGCCACATGTACCCCTTCCAG
AACGAGCTGTTCCAGTACTTTCAGGATGTTGCCACCAAGTACGGACTTCCCGACAAGAGC
ACTCTCAACACCGAAATTGTGGAGATGCGATGGAACGAGAAAACCAAGGAATATACCACA
ACTCTACGAAACGTCAAGACTGGAAACACCCACACTCACCGATCCAAGGTGGTGTTTGTG
GGCCGAGGATGTCTCGTGGCCCCTAACAAGCTTAACCTGCCTGGTCTCGAGACCTTTAAG
GGACCCGTCATGCACACTGCCCAATGGGACCATAAGAACTCCATTGTCAACAAGAACGTG
GTTGTTGTTGGCCACGGTTGCTCTGCTGTGCAGGTTGTGTCTGATATTGCACCAAAGTGT
AAGACCCTGACCCAGTTTGCCCGGTCTCCACAGTGGATTATTCCTCGAATCGAAAAGATT
CTTCATCCTGGCTTCATGAAGTTCCTATCTTACATTCCAGGAGCAGTCCAACTAACTCGG
CTGGTGCTCTTCTTCCTGCTCGAGTACTCGTGGACCATGTTCTCTGGAGCTTGGTGGTCA
AAGCTTGACAACAGAATCAAGTCCACTCTGACATCCAGATGGATGCGATCTAAAGTGCCC
GCCAAATATCATGACGTCATTGTGCCCAAGTTCTCCATGGGCTGCAAGCGAACCATCTTT
GATCCCGGTTACCTCAAGCAGCTGTGGCTTCCCACCATGGAATTGTCCTTTGACCCTATT
GTCAAGGTCAAGGAGCATTCAGTGGTGTCCCGAAACGGCCTCGAGTACCAGGCCGACGTC
ATTATCGACGCCACTGGCTTTGATATCCCTAAGTCAATCTCAGGACTCAAGGTCATTGGA
GAGAATGGAATCGAACTGGACCAGTTTTGGAACGGAAGAGTGTCTGCATACGAGACCGTC
CAAGTGCCTAACTTCCCCAACCTCTTTTTCATCTTCGGACCCAACGCCTTGACCGGTCAC
AACTCAGTCACCTTTGCTATCGACAATTCTCTGGTCTATGTTGACAAGGTTGCCAGAGAT
CTTGTGTCTGGTAAGCCCAACTGCACGTACGTGTCAGTGTCCGAGGAGGCCTACGACAAG
TGGGTTGACGACGTCCAGGAGGCCACTTCTAAGACCACCTTTGGATCGGGAGGCTGTGCT
TCCTGGTACCTCGGTGCCAACAAATACAACGGCACCACCTATCCCTGGACTCAGATTCGA
GCTTGGTGGCACTCGCATTTTCCCAACCAGAAAGATATCATCCGACATTAACTGATACAG
TAAGTGGGGAGAACTTAATTTACTTGAATTGATTGTATGTGAAATACAGCGAGTACAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27005g_CDS-001

Protein length: 497 aa.
Product: Conserved hypothetical protein

>YALI0F27005g_CDS-001 MTELYSHSLIVGAGFSGVATAIKHIKEWNNPDFHIYDRDSAFGGTWKANTYPGCASDVPA
IFYCLTSDPKIDWSHMYPFQNELFQYFQDVATKYGLPDKSTLNTEIVEMRWNEKTKEYTT
TLRNVKTGNTHTHRSKVVFVGRGCLVAPNKLNLPGLETFKGPVMHTAQWDHKNSIVNKNV
VVVGHGCSAVQVVSDIAPKCKTLTQFARSPQWIIPRIEKILHPGFMKFLSYIPGAVQLTR
LVLFFLLEYSWTMFSGAWWSKLDNRIKSTLTSRWMRSKVPAKYHDVIVPKFSMGCKRTIF
DPGYLKQLWLPTMELSFDPIVKVKEHSVVSRNGLEYQADVIIDATGFDIPKSISGLKVIG
ENGIELDQFWNGRVSAYETVQVPNFPNLFFIFGPNALTGHNSVTFAIDNSLVYVDKVARD
LVSGKPNCTYVSVSEEAYDKWVDDVQEATSKTTFGSGGCASWYLGANKYNGTTYPWTQIR
AWWHSHFPNQKDIIRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG