YALI0F26763g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F26763g

Location

Species Yarrowia lipolytica Positions 3414983..3418700
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3718 (nuc.)
Previous locus YALI0F26741r Next locus YALI0F26785g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26763g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26763gYALI0F26763g_mRNA-001YALI0F26763g_CDS-001

Nucleotide sequence

 

>YALI0F26763g
ATGAAAAAGCTCGCCAGACGGAGCACACGTCTGGAGAGAGCAATGAAAGAACTAGGAGAC
AACTACCTCGTTGGTGTTGCTTCTGGAAGGAGCATGGATTCCGGCCGACAGGCTACCGAA
GAAACCGACGTTGACAAGGCTTCGACAATTTCCACCACAGACTCCTCCGGTGCCAGTGGA
GCGCAGACTTTTGTTGACTTCGATGAAGCTATGGCTAGTAGCGGCTTTGTCAGCATCTAT
TCAGACGAATATCCTGTAGTGTCTGTCAGACCTTCTGAGAATGATGCAGACATCGTTTTC
GAGTCAGAAGTTTCACAACCTCTCAGTGGCTCTGAGAGTGAATCTGGCCGTGTTGAGTAT
CAGAGCGAATCCGAGGATGTTGCCTCCTCGTCTGCATATGAGACCAGCTCAAGTCGACCT
GAGACGCGTGACTCGGTGGTTGTCCTGACCAGCTCCCCGAGGGTCAACACCGCTGACTAT
CCTGAGTCTGTTGCTTCTATGGGCTCTCCCTCCGAGTCCATTAGCGGTTACGACCGAGAC
TCCCTGCCCTCCTACTCAGCGGCTGTTGTTGGCGGCTACCATATGGAATCTGAGCCGGGG
ACTTTCCCGTGTCCTCCCGTTGACACTAGCTCCCGGGAGCTACGCGAAGATCCACATTCC
GCCGAGGCAGACCTGGATTTTGCGCTTGATCGCTTCAATCTCGAAGAGGACGCAGAGTTG
GATGTGGAGAGCCGCTCCTTGGCTGCGTCTTCATCTCAGGGTACTTCGACTACTTCGTCT
ACCTTCTCGGACTCCACCTGTAGCTCTTCTGAATGCTATGTGTCGGACAGTGACGACAGC
GGTGACTCCGATGAGGATGAAGGCAGATCTCATTCTGATAGCACCGATGGTGATGGAAAC
CAGAATAGAGAAGACAGCAATTCTGACGCTTCCCAAGGGTCTCGCTACGGTTTCGAAGAC
AGTGTTGACGGCAATACCACTGAGGAATATGACAGTGATGACAGTTCCAATGAATCTGAA
AGCGACGACCTGATCCTTTTGTTCACTATTGCGAATTTGGATCCAGAGGATCTGATTCCT
ATGAGTGATGGGTCTGGTTACAGCAGCTCTGGTAGTTCTTACGACAACTGCTACGCATAT
CAGTCTGATGTTCAGAAGGTCGCGGGTCTTGCTTCCGGACCCCCCAGCTCCAGCTACGAC
TACTACGACCAAATGTCTTTCATTTCCTCAGAGGTTCCCCGTAGCCTCGACACCAAGATG
AGGGAAGAGCTGGGGATTACTGTAGGTCAGATTGATGTCGTCGACCATAACAATTCCTCG
GAAGAACGACTTGACTCTTCCTTGTCCCAGTTCAATGAGACTGGAAGCCGCGGGAGTATT
CTGGGAAACCTCCATCTGGGACGAGATTTGTGGTCAGAGCTTTCTCGGTCTCCACCCCCT
CCGAAGTCTCCAACCCCTTATCCTATGGAGTCTCTGTCGCCTGTTCTTGTTCAAAAGAAA
TTCAAATGGGATGTGCCCCCTGCTGCCCCATTCCCCAAGCCTCGCATGACTTTTGAGGAA
ACTAGTCCAAAGGCGTGCGTGGAGCCCGAGAGGTTTTTCGATGTTCCCCAATCCATGGAT
GTGTTCCCCCCTCTTCCTTTTCCCCCTGCCCCAGCTCTTAGCGTGACTGTCACTGAAGCC
TCTGAAGTTCAGTCACATGACTACTTCCCCTCCACTGTTGTGAGCTGTGAAGATGCGCGA
CTTGAAGATACCTTGAACCTTGGTGCCCACTCCTTTCGTCGTCGAGTGTCAAGACGGATC
TCTTTCACGCACACACGACTCCGACTGGATATTTGGAACAGCATGGCTGATATCCTTTGT
GGTCATGGTCTCCCTGGTGGCGCTTTTCCAGAGAGGAAAGATATTGAACAGATGGAGAGG
CAGAGTACCTCTGCGTTTCTTTCTGACCCTATGGACAGTGATCATCTTGGACTCTCCACT
TCATCTGCAGAGGTGGATGAGCTTGATTTGGAAGCTAGCGATCTTGACGATGACCTAATG
CTTCGACTCAGACGATACAGCATGGTCGACACCGGTACCAAGATTGAGCATATCGACGAA
ATTTTTGTGAGTCCTCATTCGCAGTACGCCCCAGCCAGCTCATCTTTCTGTTCCACATCT
GACTATAACTCGTCTGGGCTCACCCCAACACCAGACACATCGCCACAGGATTTCCTCCCC
ACTGATGATGTTATAGGGAAGGCTCCTCTCGCGTGCAAAACTGTGGTAATGTCCTCAGAG
GGCTCTTCCGACTTACCTACTTCCGAATCTTCTCTTGGAGACCTGGCCGCTTTCCCCGAA
GCAAGCCCTAATTCCCTGGGGTCATGCTCGGTAGTGGTAGTTAAGGGAGACGTTGGCTCA
GCCTCCTCCTCGTTGGTTATTTCGAAGCCTTCTCCAACTGCTGAATCTATTGGGCAAAGA
TCGTCGTATTCAGACCGTCTAGAGGCTGGAGCGCGAAGTGAACAAACATCCGGCGATTTT
TCTTCAAACCTACCGAGCACCGCAGATATCTCTGCTTCCTTGAGCTCATCAACTCGAGCC
AATGACACCAGAGATACATCTTCTTCAGGACCCTACACTTCATCTGCTGATGTGTCTGGC
TCGCCAACACCCAGCTCGTCTAGGCATCTGAGCTCTTCGAATGCCAACTCAGGCAGCAAT
GATTCCAAGTCAACCTGCAGCCCTCTGATTCTGTTTGACCCTTCCTCGACATGTAGAAGC
ACACCTTCTCTACCAAGACTTCGAAGAATCTGTCTTTATTCCCCCGCTATGGTCTCGTCC
GAGTCAGAGGCCGACGAGATAAAACACGAGCTGTTGGATGCTGTCTCTGACGCGGCATCT
GTAATTACTGGGACAGCAACTGTGAATGTTCTTTCGGACGTGAGTGGCACAGCCAAGGAG
AGACCAACTGCCATTCCGTCGGTGCCGCCTGCTCCTTTCCCCTCCCATCGTGTGGCCTCT
CCGGGCATTGTTTCTATTGTGCCTTACCAGCCTCCTAATGTTCCATTTTTACCTTCAACA
GAGGGTCGCAAGGATATTGCAGCCATGACCACCAACCTGCAGTCCGAGCTGTCGAGCTAT
TTCGATACCCCCAAAAAGTATAAGGGTAAGATGGTTCTCGGTGATGTGTCAGCTGGTGTT
TTGGGCCAGTCAACTCCTACATCTTCTAACATCACGGACGAGAACCTTATGGATGTTCCC
GGATCTTGTAGTGTCTGCGTTGTGGGCTCTCCCCATCCCAACTCTGGTTCGGCTTCTACG
CGAAGTTCCAGAAAACGAAGAAGGGAGAAGTCCGATGGGGAAAGTTCTCCAAGATTACTT
GTCTCCCTGAAAGAGAAGGTGAAGCGCTCCTTCAAGTCTGAGTCCAAGTTACGAAAAAGC
GAGCTGGAGGATCTTGCTGCTGCGGCCGCCGGATTCGCCTACAAAAGCCCAACTTGGAAG
AGTCCTTCATGGAAAAGTCCCACTTTCAAGAGCCCCTCTTGGAAGAGTCCATCTCATTAT
AACAACAATGATACAATGAAGCGGCATACTATCAGCAAATTCTTCAGCCGGTCCCGTGAC
GCCACCCTGCGTGACTGAAGATGTCTCAAAGTCTCTGGTAATGTCTCAACCGTTGTGCCG
ATCATCTGTCTTACCTAAAATGTATGTAATTTATGAGTATGTTTCCCCTATGAGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26763g_CDS-001

Protein length: 1206 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F26763g_CDS-001 MKKLARRSTRLERAMKELGDNYLVGVASGRSMDSGRQATEETDVDKASTISTTDSSGASG
AQTFVDFDEAMASSGFVSIYSDEYPVVSVRPSENDADIVFESEVSQPLSGSESESGRVEY
QSESEDVASSSAYETSSSRPETRDSVVVLTSSPRVNTADYPESVASMGSPSESISGYDRD
SLPSYSAAVVGGYHMESEPGTFPCPPVDTSSRELREDPHSAEADLDFALDRFNLEEDAEL
DVESRSLAASSSQGTSTTSSTFSDSTCSSSECYVSDSDDSGDSDEDEGRSHSDSTDGDGN
QNREDSNSDASQGSRYGFEDSVDGNTTEEYDSDDSSNESESDDLILLFTIANLDPEDLIP
MSDGSGYSSSGSSYDNCYAYQSDVQKVAGLASGPPSSSYDYYDQMSFISSEVPRSLDTKM
REELGITVGQIDVVDHNNSSEERLDSSLSQFNETGSRGSILGNLHLGRDLWSELSRSPPP
PKSPTPYPMESLSPVLVQKKFKWDVPPAAPFPKPRMTFEETSPKACVEPERFFDVPQSMD
VFPPLPFPPAPALSVTVTEASEVQSHDYFPSTVVSCEDARLEDTLNLGAHSFRRRVSRRI
SFTHTRLRLDIWNSMADILCGHGLPGGAFPERKDIEQMERQSTSAFLSDPMDSDHLGLST
SSAEVDELDLEASDLDDDLMLRLRRYSMVDTGTKIEHIDEIFVSPHSQYAPASSSFCSTS
DYNSSGLTPTPDTSPQDFLPTDDVIGKAPLACKTVVMSSEGSSDLPTSESSLGDLAAFPE
ASPNSLGSCSVVVVKGDVGSASSSLVISKPSPTAESIGQRSSYSDRLEAGARSEQTSGDF
SSNLPSTADISASLSSSTRANDTRDTSSSGPYTSSADVSGSPTPSSSRHLSSSNANSGSN
DSKSTCSPLILFDPSSTCRSTPSLPRLRRICLYSPAMVSSESEADEIKHELLDAVSDAAS
VITGTATVNVLSDVSGTAKERPTAIPSVPPAPFPSHRVASPGIVSIVPYQPPNVPFLPST
EGRKDIAAMTTNLQSELSSYFDTPKKYKGKMVLGDVSAGVLGQSTPTSSNITDENLMDVP
GSCSVCVVGSPHPNSGSASTRSSRKRRREKSDGESSPRLLVSLKEKVKRSFKSESKLRKS
ELEDLAAAAAGFAYKSPTWKSPSWKSPTFKSPSWKSPSHYNNNDTMKRHTISKFFSRSRD
ATLRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG