YALI0F26675g

Overview

Description some similarities with uniprot|P00424 Saccharomyces cerevisiae YNL052W (ohnolog of YIL111W) COX5A cytochrome-c oxidase chain V.A precursor
Locus type CDS
Locus tag YALI0F26675g

Location

Species Yarrowia lipolytica Positions 3410338..3410970
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 633 (nuc.)
Previous locus YALI0F26653g Next locus YALI0F26697g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26675g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26675gYALI0F26675g_mRNA-001YALI0F26675g_CDS-001

Nucleotide sequence

 

>YALI0F26675g
ATGCTCAGACAATCACGGCGTCTTTTCTGCACGTCTCAGCGGGTGCTCAAGAAGCGAGAG
TCGCCCCTTCAGACTGCCTTTGGCAACGATGACCCCTACGATGACGGTTTTTTCCACATT
GGCGGCAACAACTACAAGGTCAAGAACCCCATCAAGCCCTCCACTTTGAACATTCCCAAA
CGATGGCCCAAGATGGCCACCGACGAGCAGCAGGATGTCGTCGATTACCTGGAGGATCAG
ATGCGTGGAGACTGGAAGATTATGACTCCTGAGGAGAAGCAAGCTGGTGAGTATGGAAGG
GGAGAACAGACACTAAGGGTATGAGTATAGGAGTGAGATACTAGGAGACACAAACCCGGA
GCGGGCCCCAACCGTTACCCCGGTTGATTATTCCACAAACGAGCCCATAAACTAACCCAG
CTTACTACATCTACTTTGGACCCTGGGGACCGCGAGAGCCTAACCAGGATCCTGATCGGG
GCATGCGATTGCTTACCCGATCCATCTTGTGGATGGCTGTCGGATTCGCATTCTACACTG
CCGCCAACCAGTACATTGAGTTCTCCGAGGAGAGCGACTCTGCCTCCAAAAAATAGTCTG
TATATAGCCGAAGTCTTGTTTTCGTTTTTAGCT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F26675g_CDS-001

Protein length: 154 aa.
Product: Conserved hypothetical protein

>YALI0F26675g_CDS-001 MLRQSRRLFCTSQRVLKKRESPLQTAFGNDDPYDDGFFHIGGNNYKVKNPIKPSTLNIPK
RWPKMATDEQQDVVDYLEDQMRGDWKIMTPEEKQAAYYIYFGPWGPREPNQDPDRGMRLL
TRSILWMAVGFAFYTAANQYIEFSEESDSASKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG