YALI0F26653g

Overview

Description similar to uniprot|Q12339 Saccharomyces cerevisiae YOR004W UTP23 Essential nucleolar rRNA-processing protein
Locus type CDS
Locus tag YALI0F26653g

Location

Species Yarrowia lipolytica Positions 3409137..3410100
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 964 (nuc.)
Previous locus YALI0F26642g Next locus YALI0F26675g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26653g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26653gYALI0F26653g_mRNA-001YALI0F26653g_CDS-001

Nucleotide sequence

 

>YALI0F26653g
ATGCGACAAAAGAGAGCGAAAAACTACAAGAAGCAGATGCAGAGCTACCATCTGAACTTC
AAGTTCCGAGAGCCCTACCAGGTTCTGGTGGACCACGACCTCATCATTGAATGTGTCGAG
CACAAGTACGATTTGCTGAAGGGTCTCCAAAGAACGCTTCAGACCAAGGAGGTCAAGCCC
ATGATAACGCAACACAGTCTGAACAAGCTGTTTGAGAGCAACAACGAGGAGGCCATTCAG
CTAGGCAAGACCTTTGAGCGTCGACGAACCCTGCATTTCGAAAATAGCACTGAGACCCAG
GAGAAAAAGCTGAAGTACAATGGTTCCAACGCTGCCCGGAAGATGCATCCCAGCGAGGCC
ATTTACAAATCGGTTGTTGTCGACGGCTCCAATGTCCACAGATACGTTGTTGCTACACAA
GATCCTAGTTTGCGAGGTCGACTTCGGTCCATTCCTGGAGTCCCTCTCATTCATATGAAC
CGAGCCATCATGCTGCTGGAGCCCTTTTCCCCTGCTTCTGAGCGTGCTCGTCAGCTGATT
GAGGCGTCCAAGCTCACATCCGGTCTCAATGCCGTAAAGCGAAAGGCACCTGAGGGAGAT
GAAGAGCAGGCCAAGAAGCGAAAGGGTCCAAAGGCGCCTAACCCTCTGTCAGTCAAGAAG
AAGAAGGTATCTAAGGAGGATCAGGGTAAGCGAGAGCGACCTGAGGAGAAGGAAGATGAT
TCCCAGTCAGTCAAAAAGGTGCGACGAAAGCGTGCCAAGAGAAAAGATGGTGAGGGGGGA
GAATCCAATGAGGGTGGAGAGACTGATGAAGTTCCTCAACTTGTGAAGGATTCCCCCAGA
ACTGGAGAGGATAATGAGACTAAAGAGGAGACTCCCAAGAAGGAAACGAATTCGGAAGGC
AAGGACGATGTTCCTATGAGCGACGAATAAGCAAATAATTTATACATTGATAGATTTACA
GTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26653g_CDS-001

Protein length: 310 aa.
Product: Nucleolar rRNA-processing protein, putative

>YALI0F26653g_CDS-001 MRQKRAKNYKKQMQSYHLNFKFREPYQVLVDHDLIIECVEHKYDLLKGLQRTLQTKEVKP
MITQHSLNKLFESNNEEAIQLGKTFERRRTLHFENSTETQEKKLKYNGSNAARKMHPSEA
IYKSVVVDGSNVHRYVVATQDPSLRGRLRSIPGVPLIHMNRAIMLLEPFSPASERARQLI
EASKLTSGLNAVKRKAPEGDEEQAKKRKGPKAPNPLSVKKKKVSKEDQGKRERPEEKEDD
SQSVKKVRRKRAKRKDGEGGESNEGGETDEVPQLVKDSPRTGEDNETKEETPKKETNSEG
KDDVPMSDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG