YALI0F26543g

Overview

Description weakly similar to uniprot|O60930 Homo sapiens ribonuclease H1
Locus type CDS
Locus tag YALI0F26543g

Location

Species Yarrowia lipolytica Positions 3397146..3398129
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 984 (nuc.)
Previous locus YALI0F26521g Next locus YALI0F26565g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26543g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26543gYALI0F26543g_mRNA-001YALI0F26543g_CDS-001

Nucleotide sequence

 

>YALI0F26543g
ATGTGTGGGGAACTCGTGTGTGCACTTAAGAAGTCTAGCAACCTGTCTTCCCGCTCCCTC
TCTCCTACTACCTCACCTCACCTCACCACATCAACAATGTCTAAAACCGCCTTCATGCCT
TCCGTCTCAGTCACCACACAGACACACACAGCCCAAGCCGACAATGGACCCTACTATGCT
GTCAGAGTTGGCCATAAGCCTGGTATTTATACCAGCTACAATGCAGCACTACACGCCGCC
GAAAATTATCCATGCTCACAGCCCAAGAAGTTCGACACTCGAGCCAAGGCAGAGGACTAC
ATGGAAGAGTCCTTCACTTGCGCACCCGAGCATTGGACCAGTGTACTTCTGATTGATGAT
GAAACAGACGCCTACACATGGTTGGCTTACACAGATGGCGCATGTGAGAACAACGGTGGA
CACAGACCCAAGGGTGGCATCGGTGTCTACTTTGGAGAACTTCATCCCTGCAACTACTCG
GGCCCTCTCGTAGGAGACGTTCAGACCAACCAGAGAGCTGAGCTGTCTGCTATTTTGAAG
GCCCTCGAAATCATCGATAACAGAGGTGAAAACCTTAACTGGCAGATCCGATCAGACTCG
CAGTACGCTGTCAACTGCTGCTCGCAGTGGCTGGAGGGCTGGAAGAAAAACGGCTTCAAG
ACCGGCAAGGGAAAGGAGGTGGAGAACCAGGATCTCATTCTAGCCATCGATGAGTATCTG
CAGAAGCCGCGAACTCGGATCGGGACCCGAATCACCTTCAAACACATTCCGGGTCACGCT
GGAGAGAACGAAGAGGTGGATGCCCTCGCCAAGCAGGGTATTACCGAGTCAGTTTGGAAG
CCTTAGCAGACGACTACGTTATCCGTTTCCCACGATCTTTCCTTCTATTCAATAACTCTC
TGTAAAGCAACCCAGCTCTCAATCTTCCATAAACTCTTCTGTAAGTTAAACATTCAATAA
GCTGTGGTGATCCTTGATCACTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26543g_CDS-001

Protein length: 282 aa.
Product: Conserved hypothetical protein

>YALI0F26543g_CDS-001 MCGELVCALKKSSNLSSRSLSPTTSPHLTTSTMSKTAFMPSVSVTTQTHTAQADNGPYYA
VRVGHKPGIYTSYNAALHAAENYPCSQPKKFDTRAKAEDYMEESFTCAPEHWTSVLLIDD
ETDAYTWLAYTDGACENNGGHRPKGGIGVYFGELHPCNYSGPLVGDVQTNQRAELSAILK
ALEIIDNRGENLNWQIRSDSQYAVNCCSQWLEGWKKNGFKTGKGKEVENQDLILAIDEYL
QKPRTRIGTRITFKHIPGHAGENEEVDALAKQGITESVWKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG