YALI0F26147g

Overview

Description similar to uniprot|Q96GG9 Homo sapiens RP42 homolog
Locus type CDS
Locus tag YALI0F26147g

Location

Species Yarrowia lipolytica Positions 3360289..3361074
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 786 (nuc.)
Previous locus YALI0F26136g Next locus YALI0F26156g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26147g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26147gYALI0F26147g_mRNA-001YALI0F26147g_CDS-001

Nucleotide sequence

 

>YALI0F26147g
ATGGTACGATCAGACTGGAGGGCGCAGGAAATCAGAAGAGTCATGACGTTCACGGGGAGC
AAGGAGAAGACAGCCCGTGATGCCCTGGAAAAGTTTGACTGGAACGTCGAGGTGGCTATC
GATCATATTCTCAACACCCCCCAGGTAGACCTTTCAGGAGCTAGCAAGGTGTTTGACAAG
TACCGAAATGCCGATTCGGACGAGATCGATCTGGATGGAACCATTCAATACATCACTGAT
TTGGGTCTGTCGCTGGAGGAGCCCACTGTTCTGGCGGTTGCTATGACTGCTGGATCTCCA
TCGGTAGGCACCTTCACACGAAAACCCTTTGTTGAGGGCTGGGCTGCCATTGGCGGCGAC
ACGCTGCCGGCCCAGCAGAAGTTGTGCAGGTCGTTTGCCGAGTCCATGACCTCGCTGAAT
GCCGATTTCCAGAAAATCTACAAGTTCACATACGGTTTCCTGCTGCAGGAGGGCCAGCGG
GTGTTGCCTCAGGAAACGGCTGTGGACTACTGGCGGCTGCTACTGACGGGGAAATACGAG
CATCTGGACAAATGGCTGTCTTTTGTGACCGAAAAATACAAGCGCAACATCTCCAGGGAT
GCCTGGAACATGTTATACGAGTTTATGCTGTTCCAGGCCAAGGATCCCTCTCTAGAGAGC
TACGATGAGGACGGTGCCTGGCCCAGTGTCATTGATGAGTACGTTGAGTTTCTCAAGGAG
TGATGTATAGTTGGAGACGGTATATGATAGTAATAAAAATTCAAAAATACCACCTTTATT
TTTTCC

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F26147g_CDS-001

Protein length: 241 aa.
Product: Conserved hypothetical protein

>YALI0F26147g_CDS-001 MVRSDWRAQEIRRVMTFTGSKEKTARDALEKFDWNVEVAIDHILNTPQVDLSGASKVFDK
YRNADSDEIDLDGTIQYITDLGLSLEEPTVLAVAMTAGSPSVGTFTRKPFVEGWAAIGGD
TLPAQQKLCRSFAESMTSLNADFQKIYKFTYGFLLQEGQRVLPQETAVDYWRLLLTGKYE
HLDKWLSFVTEKYKRNISRDAWNMLYEFMLFQAKDPSLESYDEDGAWPSVIDEYVEFLKE
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG