YALI0F26136g

Overview

Description similar to uniprot|Q6WNK7 Saccharomyces cerevisiae YBR111W-A SUS1 Protein involved in mRNA export coupled transcription activation; component of the SAGA histone acetylase complex
Locus type CDS
Locus tag YALI0F26136g

Location

Species Yarrowia lipolytica Positions 3359517..3359920
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 404 (nuc.)
Previous locus YALI0F26125g Next locus YALI0F26147g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26136g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26136gYALI0F26136g_mRNA-001YALI0F26136g_CDS-001

Nucleotide sequence

 

>YALI0F26136g
ATGACCGACCAGGTACGTTCGGATGTCCAGGAAAAACTGGTTCAGAGCGGAGAGTACGAA
AAGTGAGTACCCAAATCATGGACACAGACCCAGACGCATGGAAAATAATCGACATTAAAC
ACAAACACCAACTAAACCAGACTCTCTCAACACATCCAGGCCCGACTTCGAAACAGCGGC
TGGTACGACAAGGTCAGTGCTTTGGCCCAGGAGGAGGCTAGCAAACAGGATAAGGTGGAA
CTGAGTTCTCTGTTGGAAAAAGTACAGCCTCAGGCATGCGATCTGGTTGACGACGACATC
AAGGTCGAGACTCTCAAGATGATTGCCTCTTTTCTCGAGGGAGCTTTAAAGTAGTGGAGG
ACTGCTGTATTTATGTGCACTAATGTATTTATTTGAAGAATGAG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F26136g_CDS-001

Protein length: 92 aa.
Product: Component of both the SAGA histone acetylase and TREX-2 complexes, putative

>YALI0F26136g_CDS-001 MTDQVRSDVQEKLVQSGEYEKLSQHIQARLRNSGWYDKVSALAQEEASKQDKVELSSLLE
KVQPQACDLVDDDIKVETLKMIASFLEGALK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG